Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1886 ATGAAGACCTTGAGCTACCATGTTCTCACGGGGCGTTGGTTCATGCTATTTGCATCGTTACTCATCATGTCCGTTGCAGGGGCAACCTACATGTTCGGAATATACTCTAACGAGGTGAAAACCTCATTAGGGTACGACCAATCCACTCTCAACTTGCTAAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCATATCCGGGTTGGTCAACGAGATAACACCACCTTTTGTCATACTCTTAATTGGGAGAGGAGATAAAACAAATGAAAGCCAAAACGCAAGGTTTGAGTACTACCGATTCAGCACTACCCCAGTTGAAAGTAGTAGTCACTGA 336 0.4494 MKTLSYHVLTGRWFMLFASLLIMSVAGATYMFGIYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVISGLVNEITPPFVILLIGRGDKTNESQNARFEYYRFSTTPVESSSH 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1886 111 PANTHER MFS TRANSPORTER 1 83 - -
Aed2g1886 111 Pfam Nodulin-like 12 83 IPR010658 -
Aed2g1886 111 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1886 Aed-Chr2 23517360 23518222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1886 1 83 Nodulin-like Gene Family AT2G39210 75.904 5.53e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1886 - - gmx:100797779 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1886 2 23517360 23518222 Aed2g1886 2 23517360 23518222 ECH