Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1885 ATGAAGACCTTGAGCTACAATGTTCTCACTGGGCGTTGGTTCATGCTCTTTGCATCTTTACTCATCATGGCTGCAGCAGGAGCAGCTTACATGTTCGGCATGTACTCCAACGAGGTAAAAAACTCTCTGGGCTACGACCAAACCACTCTCAACTTGCTCAGCTTCTTCAAAGATGTAGGTGCCACCGTTGGAATCATCTCAGGTGTTTTTGAATTATCAGGAGAAAATATGACAGATGAAATAAGTGAGTCTCACACGGGGTTTTGA 267 0.4457 MKTLSYNVLTGRWFMLFASLLIMAAAGAAYMFGMYSNEVKNSLGYDQTTLNLLSFFKDVGATVGIISGVFELSGENMTDEISESHTGF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1885 88 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 70 - -
Aed2g1885 88 Pfam Nodulin-like 12 70 IPR010658 -
Aed2g1885 88 PANTHER MFS TRANSPORTER 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1885 Aed-Chr2 23513168 23515387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1885 1 70 Nodulin-like Gene Family AT2G39210 67.143 3.90e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1885 - - gmx:100798313 114.775