Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1869 ATGGGTAAAACATGCAGTAGCAGTAGAAGTAGTTGTTCTTGGGGATTGTGGATGCTGCAGGGAGGGTTTGGAGTAGTGGTGCCCATGATGATGAGGAAACTACGAACAACTTTCTCATCACGTTCAAAAGGGGTGAAGCAGGGACATTTTGTGGTGATTGCAACACAAGGTTGGAAGCCAGAGAGATTCTCTATTGAGTTGGGGTTTTTGGATCACCCTGACTTTGTGAAGTTGCTAAAGCAAGCTGAAGAAGAGTTCGGGTTCTCTCAGGTAGGAGCACTTGCAATTCCTTGCCAACCAGATGACCTCAAGAGAATCGTTAATAATATTGCAAGGAAAAAGAATATATAG 351 0.4387 MGKTCSSSRSSCSWGLWMLQGGFGVVVPMMMRKLRTTFSSRSKGVKQGHFVVIATQGWKPERFSIELGFLDHPDFVKLLKQAEEEFGFSQVGALAIPCQPDDLKRIVNNIARKKNI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1869 116 Pfam Auxin responsive protein 37 108 IPR003676 GO:0009733
Aed2g1869 116 PANTHER SMALL AUXIN-UP RNA-RELATED 20 109 - -
Aed2g1869 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1869 Aed-Chr2 23378062 23378412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1869 45 112 Calmodulin-binding Proteins AT4G34750 39.706 6.21e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1869 - K14488 gmx:100816753 180.259