Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1868 ATGGAGGTTGGAAAGAAGAAGATGCTCCTCAAGTCTTTGATCAGAAAGGTGATAAAGGGTGTTCCATTCTTGGCACCCAATGGAGAAAGAGCACGTAGTACGAGAAGAGTTTGTTATTTGAGTGACATTGATGATGAGAATAATAATGAAAGGACAAGAACAACAAAGGTACCAGAAGATGTTAAGGAAGGACACTTTGCGGTTATAGCAATGCAAGGTGAAGAAACCAAAAGGTTCGTTGTTGAGTTGGATTATTTAACTGATCCTGCTTTCTTGAAGCTGCTGGAGCAAGCAAGGGAAGAGTATGGCTTCGAACACAAGGGTGCACTTGCACTTCCTTGCACCCCCCAAGAACTTCAGAAGATTATCGAGAATCATCGTAATTAA 387 0.416 MEVGKKKMLLKSLIRKVIKGVPFLAPNGERARSTRRVCYLSDIDDENNNERTRTTKVPEDVKEGHFAVIAMQGEETKRFVVELDYLTDPAFLKLLEQAREEYGFEHKGALALPCTPQELQKIIENHRN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1868 128 Pfam Auxin responsive protein 42 123 IPR003676 GO:0009733
Aed2g1868 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 127 IPR003676 GO:0009733
Aed2g1868 128 PANTHER F8A24.8 PROTEIN 12 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1868 Aed-Chr2 23367631 23368017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1868 45 126 Calmodulin-binding Proteins AT3G43120 41.176 3.27e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1868 - K14488 gmx:102661602 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1868 2 23367631 23368017 Aed2g1868 2 23367631 23368017 ECH
Aed2g1868 2 23367631 23368017 Aed8g0429 8 3560786 3561109 PCT