LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed2g1856	ATGTTACTAGTGGTGCAAAGGGAGTACTTTGTCCAGTATCACGGTCTCGCTCATGCTCACAACTGCTGGATTTCAGAATTAAAATTGTGTCTTGAGGCTCCTAAGTTTAAGAGAAAACTGCAGGTTCAGTTACCCTTCATAGTTACCAGGTGGAAAAGAGATTGGAGTATACCTCACTGTTTGCTTCTAAAAAGGGAAATTGTATTCTCAAAACAAAATAGTCAACATTTTGATGGGCATGGTGGCAATGGTTCAACTTGCCGTTATGAGTGGCTTGTCAAATGGACCGGTCTTGATTATGATAATGCTACGTGGGAGTTAGATGATGCTTCATTTCTGATGTCACCAGAAGGCAAGAAACTCATAAATGATTACGAAAGTCGACGCAAGAGAGCAGATAGACTGTCAAAAAATCATTTTGAAGCTAATGAGGAGAGAAAAGCTTCCTTTGCTGAATTATCAGTGTTGCCATCTGGAGATTCACCAGGACTTTATAACCAGCATTTGGCTTATGTGAACAAGCTTCGCATGTGTTGGCACAAATGTCAGAGTGCTCTTATTGTAGATGATCAAATTGAGCGGGAGCGGGTTATGAAGAGGCCTTTTCTCATCATCTCAACTTCTACTACCCTCTCTGTATGGGAAACAGAGTTCTTACGTTTGGCACCATCTGCCAATCTTGTAGTTTACAAGGGAAACAGAGATGTACAAAGTGGCATCAGGGCGTTAGAGTTTTTTAATGAAGATGGTGGAATATTATTTCAAATACTGTTATCATCTTCTCATATTATTGTTAAGGACTTGCAAGAACTAAGATGCATTACATGGAAAGCAATAATAATTGATGAATGCCAACAATCCAGAATTTCAGGATACTTGAACAATATCAAGATTCTAAAAGCTGAAATGAGGCTCCTTCTTGTTAGTGGACAAATCAAGGAAGATCGAGATGATTACATCAAACTGCTTTCATTCCTCAAGTCTGGACAACATGGGTCAAGTATTGCTCAAACGTCCCCTTATTCCTCTGTTAGCATTTCCAATTTGAAGAGTCAATTGGACAAATATGTTGTATTCAAATGCAAATCTGGCTCCACTAGGTTTGTAGAGTATTGGGTTCCAGCCTGCCTTTCCTATTTACAGCTTGAGCAGTATTGTTCATTGCTGCTTTCAAACTTAATGTTGTTATGCTCAGGCCAAAAGTCTGACTCATGCTGTGACCACCCTTATCTGCTGGACCCGGCACTGCATAGTTCTGTTACTAAAGGTCTACCTGTTGAAGAGCATTTAAAATATGGTATACAAGCAAGTGGAAAATTGAAACTTCTTGAAAAAATCCTTTCGGAAGCAAAAAGTCGTGGGTTAAGGGATGCCCTTCCAACAATTGCCTTTTCTAGGGAGTCGTCTGGCTACCGTTTGATGCTTGTTGGCACAGCCCAACTTGTCGGGAATAATATTGGGAGTTTTGATAGAATTCTTGAGGATTCAGTTAGTTCTCTTTCATTTAAAAAACTGCAGTCAACTTGTGGTTCTGGATCGATTGGAGATATTTTGGATGATGTTCTCTGTCAGAGATTTGGTTATACCCCTAAAACAAAGCAAGCTGCTTTAGACACATTTAATGATGGAGAAAGTGGAAAATTTGTCTTCTTGATGGAAAGCCATGATTGTCTCTCTAGTGTTAAGCTTTCTTCAGTGGACACTGTTATATTGTTTGACAGTGATTTGGACCCACAAAATGACCTAAGAGGCTTACAAAGGATGCCTATCAGCTCACAGTTTAAACAGTTTACTGTTTTCAGATTGTACTCATATTTCACTGTTGAAGAAAAGTTGTTACTGCTCGCAAAAGAGGGTATAGTTCTCGACAGCGATGTGCAGTTGCTTAGCCAGAGTATTTGTCACTCCCTGCTAAGATGGGGTGCCTCCTATCTGTTCAATAAGCTTGGTGACTTGCATGCCAGAGCTGTTTCTACTCCAGACCTTGTAGATATGTCATTTCTATGTGATGTAATCTGTGAATTATCATCCCGATTGGTTTGTGGTGCCAATGATAGATGGTCATTCATATCAAGAATGCAGCAGAATGGAGGGGAATATGTGAGGAACATTTTATTGCTAGGAGAAAAAAAAATAAAATTAGGCAGCGAGTCATGTGGTTTTTCCTGGAGTGATCTTGAAGGAAGGCATCCTCAATGGAAATTTTTGCCTGTTTCATCTCAGAGGATCAGGAGCACAGTCAAACATTTTGGATACATACTAAAGAATCTGAATGTGAAAAAGAGGACAGTGTTGAAGGGCAATGTTGATCCCAACAGGAGGAAAGTTTCCAAGGATAGTGTTGATCCCAAGAGGAGAAGAGTGCCCAAGGATAATGTTGATGCTGAGTGTAGGAAATTGACCACGAATAAATTTGATCACAAGAGGAGGAAGGTGTCCAGTGATGTTGAAACAAAGGGGAGGAAAGTGTCAAATCAAACCATTGATCCTAAGACTAGGAAGGTGTCGAATGATATTGTTGATTCTAAGGTCAGGAAAGTGTCCAAGAATATTGTTGATTCCAAATATCGACAAACAAGGTTGAAGAGCAAGAAGAATCCAAGTGTTGTCAATAGAGCAAGTAATTCAAATGGTTTGTCTAATACACTTAATTCCACAGGGCATCCCTTGACCAATGAAACTACAGGAAAGATTGCAACAAACATGCAATTTTCAGAGAAAAAGAAACTGCTTGACATACCAAATAGCAGCATATTATTGCCAAAGCCAGATATATCAGCACCTTTAAGTGGAAGTCACGACTCCCCAAGTTGGTGCAAGTGCATTTCCTTGGGACTCCTGGTGGCTAGATTTGCATTCTTTGCTGTTGGAGTAATTTCTGGTGAGGGTCAATCTGATGTTGTAGATAGGCTGAATATGAAAGTCTAA	2928	0.3982	MLLVVQREYFVQYHGLAHAHNCWISELKLCLEAPKFKRKLQVQLPFIVTRWKRDWSIPHCLLLKREIVFSKQNSQHFDGHGGNGSTCRYEWLVKWTGLDYDNATWELDDASFLMSPEGKKLINDYESRRKRADRLSKNHFEANEERKASFAELSVLPSGDSPGLYNQHLAYVNKLRMCWHKCQSALIVDDQIERERVMKRPFLIISTSTTLSVWETEFLRLAPSANLVVYKGNRDVQSGIRALEFFNEDGGILFQILLSSSHIIVKDLQELRCITWKAIIIDECQQSRISGYLNNIKILKAEMRLLLVSGQIKEDRDDYIKLLSFLKSGQHGSSIAQTSPYSSVSISNLKSQLDKYVVFKCKSGSTRFVEYWVPACLSYLQLEQYCSLLLSNLMLLCSGQKSDSCCDHPYLLDPALHSSVTKGLPVEEHLKYGIQASGKLKLLEKILSEAKSRGLRDALPTIAFSRESSGYRLMLVGTAQLVGNNIGSFDRILEDSVSSLSFKKLQSTCGSGSIGDILDDVLCQRFGYTPKTKQAALDTFNDGESGKFVFLMESHDCLSSVKLSSVDTVILFDSDLDPQNDLRGLQRMPISSQFKQFTVFRLYSYFTVEEKLLLLAKEGIVLDSDVQLLSQSICHSLLRWGASYLFNKLGDLHARAVSTPDLVDMSFLCDVICELSSRLVCGANDRWSFISRMQQNGGEYVRNILLLGEKKIKLGSESCGFSWSDLEGRHPQWKFLPVSSQRIRSTVKHFGYILKNLNVKKRTVLKGNVDPNRRKVSKDSVDPKRRRVPKDNVDAECRKLTTNKFDHKRRKVSSDVETKGRKVSNQTIDPKTRKVSNDIVDSKVRKVSKNIVDSKYRQTRLKSKKNPSVVNRASNSNGLSNTLNSTGHPLTNETTGKIATNMQFSEKKKLLDIPNSSILLPKPDISAPLSGSHDSPSWCKCISLGLLVARFAFFAVGVISGEGQSDVVDRLNMKV	975

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed2g1856	975	Gene3D	-	530	623	IPR027417	-
	Aed2g1856	975	Gene3D	-	368	456	IPR027417	-
	Aed2g1856	975	MobiDBLite	consensus disorder prediction	862	894	-	-
	Aed2g1856	975	MobiDBLite	consensus disorder prediction	806	828	-	-
	Aed2g1856	975	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	275	623	IPR027417	-
	Aed2g1856	975	Pfam	SNF2-related domain	198	333	IPR000330	GO:0005524\|GO:0140658
	Aed2g1856	975	PANTHER	CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED	508	864	-	-
	Aed2g1856	975	PANTHER	HELICASE PROTEIN MOM1-LIKE ISOFORM X1	508	864	-	-
	Aed2g1856	975	PANTHER	HELICASE PROTEIN MOM1-LIKE ISOFORM X1	5	456	-	-
	Aed2g1856	975	MobiDBLite	consensus disorder prediction	863	894	-	-
	Aed2g1856	975	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	154	331	IPR027417	-
	Aed2g1856	975	ProSiteProfiles	Chromo and chromo shadow domain profile.	63	137	IPR000953	-
	Aed2g1856	975	PANTHER	CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED	5	456	-	-
	Aed2g1856	975	MobiDBLite	consensus disorder prediction	770	789	-	-
	Aed2g1856	975	Gene3D	-	56	128	-	-
	Aed2g1856	975	SUPERFAMILY	Chromo domain-like	84	129	IPR016197	-
	Aed2g1856	975	Gene3D	-	164	367	IPR038718	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed2g1856	Aed-Chr2	23281962	23289235	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SNF2	Aed2g1856		SNF2_N	3.4e-11	CL0023

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed2g1856	-		K11643	gmx:100813574	1268.83