Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1846 ATGGCGAAAGACATTGAAACGGAGGTTCAAAGTGGGTTGCCACACAAGGACTACTACGACCCTCCCCCCGCCCCATTCTACGACCCCGCTGAACTCCGCAAGTGGTCCTTCTATAGAGCCGTCATTGCCGAGTTCGTCGCCACCCTTCTATTCCTCTACATCACCATCCTCACCGTCATCGGTTACAACCACCAGACCGCCGCCGGTGGCCCCGACCTCTGCAATGGCGTCGGCATCCTCGGCATCGCTTGGGCCTTCGGGGGCATGATTTTCGTCCTCGTCTACTGCACCGCCGGCATATCAGGGGGTCACATAAATCCGGCGGTGACGTTCGGGTTGTTTCTGGCGAGGAAGGTGTCGCTGATAAGAGCAGTTGCGTACATAGTGGCTCAGGTGTTGGGAGCCATAAGTGGAGTAGGGCTTGTGAAGGCTTTTCAGAAGAGCTACTACAACAGGTACAAAGGTGGCGTGAACTTGCTCGCTGATGGTTACAGCAAAGGCACCGGTTTGGGCGCTGAGATTATTGGCACCTTTATTCTTGTCTACACCGTCTTCTCCGCCACCGATCCCAAGAGAAAAGCCAGAGATTCCCATGTTCCCGTATTGGCACCACTTCCAATTGGGTTTGCGGTTTTCATAGTTCACTTGGCTACCATCCCTATCACCGGCACTGGCATCAACCCAGCTAGAAGCCTTGGGCCTGCTGTCATATACAACAACGAGAAGGCATGGGATGACCAGTGGATCTTCTGGGTTGGACCCTTCGTCGGTGCTGCTATTGCTGCAATCTACCACCAGTACGTGTTGAGGGCCCAGGCGGCAAAGGCTCTCGGCTCTTTCAGGAGCTCCTCAACCCTGTAA 861 0.5494 MAKDIETEVQSGLPHKDYYDPPPAPFYDPAELRKWSFYRAVIAEFVATLLFLYITILTVIGYNHQTAAGGPDLCNGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYIVAQVLGAISGVGLVKAFQKSYYNRYKGGVNLLADGYSKGTGLGAEIIGTFILVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGPAVIYNNEKAWDDQWIFWVGPFVGAAIAAIYHQYVLRAQAAKALGSFRSSSTL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1846 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 283 IPR034294 -
Aed2g1846 286 Pfam Major intrinsic protein 31 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 SUPERFAMILY Aquaporin-like 31 270 IPR023271 -
Aed2g1846 286 TIGRFAM MIP: MIP family channel proteins 43 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Aed2g1846 286 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 CDD MIP 39 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g1846 286 PANTHER AQUAPORIN PIP2-4-RELATED 1 283 - -
Aed2g1846 286 Gene3D Glycerol uptake facilitator protein. 24 286 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1846 Aed-Chr2 23172681 23174734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1846 1 286 Major Intrinsic Protein MIP AT3G53420 79.861 3.07e-165 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1846 K09872 - gmx:100785783 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1846 2 23172681 23174734 Aed2g1846 2 23172681 23174734 ECH
Aed2g1846 2 23172681 23174734 Aed1g1125 1 11063274 11064664 ECH
Aed2g1846 2 23172681 23174734 Aed5g0525 5 3772803 3774919 ECH