Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1838 ATGAAGAAGAATCCTTGTTCTTTTTGTACTTGTTTCTCAGCATCGGTCAAAGAACAAACCAAGCACGGTATAAACATAATTATGGATTGCATCTGTAATAATTACCCAACAGAGGAGGAGGCAACAGATGAAGATAATAATGATGGCAGCTTTCGCATATTCACTTATAGAGAATTGAATTCTGCCACACGTGGTTTTCATCCCTCGGAAAAGATTGGAGAAGGAGGCTTTGGCTCTGTCTACAAGGGGCAGCTTCGGGATGGAACTTTTGTGGCCGTGAAAGTGCTTTCGATTGAGCTAGATTCCTTGAGAGGAGAGAGGGAGTTTGTGGCAGAATTGAATACACTAGCAAATATCAAGCACCAAAATCTTGTCATTCTACGAGGGTGTTGTGTAGAAGGAGCTCAAAGATACATAGCGTGGGCAGCGTATGAGGCTAATGATGTTCTGAGAATGGTGGATCCAGTGCTGTATAACAAGTATCCGGTGGAAGAAGCAAAACGGTTCCTCATGGTGGGGCTGCGCTGCGTGCAAGAAATGGCGAGGCATAGGCCACGAATGTCAGAGGTTGTAGAGATGTTGAGCAATAACAACGTTGAGATGGGAGAGTTTAGTATTTCGCATCCAGGATTTGTCACTGATCTCAGGAGTGCCAGAACCACGAGCCAAATGAATCCATCACAAGAATCAACTGCTACTGCAGCAGATTCCTCCGGATGGAGTACCACCAATCTTGCCCGTTAG 744 0.4503 MKKNPCSFCTCFSASVKEQTKHGINIIMDCICNNYPTEEEATDEDNNDGSFRIFTYRELNSATRGFHPSEKIGEGGFGSVYKGQLRDGTFVAVKVLSIELDSLRGEREFVAELNTLANIKHQNLVILRGCCVEGAQRYIAWAAYEANDVLRMVDPVLYNKYPVEEAKRFLMVGLRCVQEMARHRPRMSEVVEMLSNNNVEMGEFSISHPGFVTDLRSARTTSQMNPSQESTATAADSSGWSTTNLAR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1838 247 PANTHER RECEPTOR-LIKE KINASE 138 222 - -
Aed2g1838 247 MobiDBLite consensus disorder prediction 218 247 - -
Aed2g1838 247 Pfam Protein kinase domain 67 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1838 247 SUPERFAMILY Protein kinase-like (PK-like) 49 168 IPR011009 -
Aed2g1838 247 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 145 - -
Aed2g1838 247 Gene3D Phosphorylase Kinase; domain 1 36 142 - -
Aed2g1838 247 ProSiteProfiles Protein kinase domain profile. 66 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1838 247 PANTHER RECEPTOR-LIKE KINASE 38 145 - -
Aed2g1838 247 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 138 222 - -
Aed2g1838 247 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1838 Aed-Chr2 23117958 23119730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1838 46 147 Receptor kinase-like Gene Family AT1G29740 49.515 1.03e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Aed2g1838 Pkinase 2.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1838 - - gmx:100785251 205.297