Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1834 ATGAGTGTGATCGACATTCTCACCAGAGTTGATTCCATTTGTAAAAAATACGACAGATATGACGTCGAAAAGCAAAGGGACTCCAATCTCTCCGCCGACGATGCATTCGCCAAACTCTACGCCGACGTCGACGCCGACATCGAAGCCTTACTTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAGTAAGGCTTCCACTGTAGCGATCAATGCCGAGATTCGTCGAACCAAGGCTAGGTTGTTGGAGGAGGTTCCCAAGTTGCAGAGATTGGCTATGAAAAAGGTAAAGGGGCTTTCATCTCAAGAATTTGCTTCCCGTAATGATTTGGTTATTGCATTGCCAGATAGGATTCAAGCTATCCCTGATGGAACCCCTGCACCACCTAAACAGACTGGAGGTTGGGCAGCTTCAGCCTCACGTCCTGGAATTAAATTTGATTTAGGTAAGAAATTTTCCATGTCTCAGTGGGAACTAGATCAAGGTTTGGATATGATCGCCGAAGGATTGGATACTTTGAAAAACATGGCACATGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGATACTAAGGTGGACAGAGCATCTTCTGACCTTAAAAATACCAATGTTAGACTTAGAGACACAGTGAACCAGCTTCGATCCAGTCGAAACTTTTGTATCGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCTTATTTGTACAAGTAA 732 0.4303 MSVIDILTRVDSICKKYDRYDVEKQRDSNLSADDAFAKLYADVDADIEALLQKAETASKEKSKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFASRNDLVIALPDRIQAIPDGTPAPPKQTGGWAASASRPGIKFDLGKKFSMSQWELDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDRASSDLKNTNVRLRDTVNQLRSSRNFCIDIVLLIIILGIAAYLYK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1834 243 Gene3D - 155 213 - -
Aed2g1834 243 SUPERFAMILY SNARE fusion complex 156 212 - -
Aed2g1834 243 SMART tSNARE_6 146 214 IPR000727 -
Aed2g1834 243 CDD SNARE_Qc 157 212 - -
Aed2g1834 243 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 152 214 IPR000727 -
Aed2g1834 243 Coils Coil 40 60 - -
Aed2g1834 243 PANTHER SYNTAXIN-73 150 242 - -
Aed2g1834 243 PANTHER SYNTAXIN-73 1 146 - -
Aed2g1834 243 Pfam SNARE domain 189 238 IPR000727 -
Aed2g1834 243 ProSitePatterns Syntaxin / epimorphin family signature. 158 197 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aed2g1834 243 PANTHER SYNTAXIN 150 242 IPR045242 -
Aed2g1834 243 PANTHER SYNTAXIN 1 146 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1834 Aed-Chr2 23090656 23092984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1834 1 242 SNARE and Associated Proteins AT3G09740 67.557 2.09e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1834 K08506 - gmx:100804155 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1834 2 23090656 23092984 Aed2g1834 2 23090656 23092984 ECH