Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1823 ATGGGGAGGAAGGGAAATTGGTTTTCCAGTGTGAAGAAAGCACTCAGCCCTGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGACTTCAGTCTCATACTCGGAAGCTGATAAGGCACCACCACCTCCTATTCCTCCACAAGAAGAGATTAAAGTAACTGATATTGAAAATGAAATCAAACATGATCACGATCATGTTGTTGAAGTTGCAACTGCCATGGTTGCCGAGGAACCTGTTCCATCTGTTGTTCAGATAGAACCTGTTAGGGTTGAAGCTGCCCCAATTGCTCGTTTTGCTGGTAAACCAAAGGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGTGGATACTTGGCAAGAAGAGCATTGCGAGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTGATGGAAGGTCCGGTTGTAAAACGCCAAGCCACAAGTACCCTCCGCTCGATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGTTCCCGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGAGACAGCTCTTACAGAAGCATGCAAGAGAGCTTGAAAGCTTGAGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTACTGTGAGAAGAGAAAGAGCACTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCATCAAGATCTGTAAATCCAATGTTCATGGATCCAACCAATCCGACCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGACCTTGGGAGAGCCGTAGCCATACGGATAGAGAGTTGAATGACCACTCATCCGTGAGAAGCTCAAGCCGCAGCATCACCGGTGGAGAAATCAGCAAGTCATTCGCTCGTTTCCAGCTCAATTCTTCGGAAAAGCAGTCTCCAACAGCCAGTCAGAATCCTGGCTCGCCTAGCTTTCAGTCCACTCCTTCCAAGCCAGCTTCAGGATCTGCTAAGAAACCAAAGAAGATAAGCCCCAGCCCAAGGGGTAGCTGGGTTACGGACGAGGACTCCAAAAGCTTGGTCAGTGTACAGTCAGACCGGTTCCGGAGGCACTCCATTGCCGGTTCATCGGTGAGAGATGATGAGAGCCTTGCTAGCTCTCCAGCACTTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCCCAGAAAATGGAAAATCTGAGAAAGGATCCTCTGGGAGTGCAAAGAAGCGGCTTTCTTTCCCAGCTTCACCTTCCAGGCCGAGGCGCCACTCAGGTCCACCAAAGGTAGAAAGCAGCACCTTAAATGCAGAGTTAGCTGTGGACAAGGGTGTGGACAGTTGA 1434 0.4812 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLETSVSYSEADKAPPPPIPPQEEIKVTDIENEIKHDHDHVVEVATAMVAEEPVPSVVQIEPVRVEAAPIARFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEATVRRERALAYAFTHQQNWKNSSRSVNPMFMDPTNPTWGWSWLERWMAARPWESRSHTDRELNDHSSVRSSSRSITGGEISKSFARFQLNSSEKQSPTASQNPGSPSFQSTPSKPASGSAKKPKKISPSPRGSWVTDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPALPSYMVPTQSAKAKSRTQSPLAPENGKSEKGSSGSAKKRLSFPASPSRPRRHSGPPKVESSTLNAELAVDKGVDS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1823 477 MobiDBLite consensus disorder prediction 319 347 - -
Aed2g1823 477 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Aed2g1823 477 SMART iq_5 116 138 IPR000048 GO:0005515
Aed2g1823 477 MobiDBLite consensus disorder prediction 403 432 - -
Aed2g1823 477 MobiDBLite consensus disorder prediction 319 477 - -
Aed2g1823 477 MobiDBLite consensus disorder prediction 285 305 - -
Aed2g1823 477 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Aed2g1823 477 MobiDBLite consensus disorder prediction 1 60 - -
Aed2g1823 477 PANTHER IQ-DOMAIN 5-RELATED 1 471 - -
Aed2g1823 477 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 471 - -
Aed2g1823 477 Gene3D - 99 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1823 Aed-Chr2 23028212 23032155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1823 1 465 IQD Protein Family AT5G03040 54.334 1.30e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1823 - - gmx:100800080 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1823 2 23028212 23032155 Aed2g1823 2 23028212 23032155 ECH
Aed2g1823 2 23028212 23032155 Aed8g0381 8 3146615 3151031 PCT