Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1805 ATGGAAAGTGATGCTGACTTCAATTCATTTGCCACATCTTCCTCCTCTTCAATCTTCTTTGACACCAACACTTCTAGCACATCCTCCTCCTCCTCCTCAACATCTCCTACCTCAAATTCAGATTCATGCACAAAAGAACACACCAAAACCACTCAAAATGACTCAACTACTACTTCTCAAACCTCATTGGAAAATGGAAAGGACTCAAAAGGGTGCAAGAAGAGGCAGTGTGAGAACAGCAGCAATGAGGATCATCACCACCCTACTTATAGGGGTGTGAGGATGAGAAGTTGGGGGAAATGGGTGTCGGAAATCCGCGAACCGAGGAAGAAGTCAAGAATATGGCTTGGGACATACCCTACAGCAGAAATGGCAGCTAGAGCACATGATGTGGCTGCCATAGCCATCAAGGGCCATTCAGCATACCTCAATTTCCCTGAATTGGCTCAAGAGCTTCCAAGGCCAGATAGCACTTCATCTAAGGACATTCAAGCTGCTGCTGCAAAAGCGGCAAACACTGCCTTTGAAGTGCTTAAGCATTGTCAAAGTACTGAAGCAGAACCAAGCCAAGCAGAACATGCCTCATCTTCAACTCTCTCAATTCATGACAATACTACTCACGAAGAGCCTTCAAGTAATTCTCATGACTCTACCAATGATGATGACACTTTGTTTGACCTACCAGATCTTTTCCCTGATGGAAACCATGGACTTTGCTCCTATTCTTCTTCTTCTTCTTGGCATTTATGTGCATCACTGCAACTGCATTCTGCACAGAGAATAACCAGTTGA 792 0.4457 MESDADFNSFATSSSSSIFFDTNTSSTSSSSSSTSPTSNSDSCTKEHTKTTQNDSTTTSQTSLENGKDSKGCKKRQCENSSNEDHHHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAAIAIKGHSAYLNFPELAQELPRPDSTSSKDIQAAAAKAANTAFEVLKHCQSTEAEPSQAEHASSSTLSIHDNTTHEEPSSNSHDSTNDDDTLFDLPDLFPDGNHGLCSYSSSSSWHLCASLQLHSAQRITS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1805 263 MobiDBLite consensus disorder prediction 182 221 - -
Aed2g1805 263 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Aed2g1805 263 MobiDBLite consensus disorder prediction 1 89 - -
Aed2g1805 263 PANTHER ETHYLENE RESPONSE FACTOR 3 251 - -
Aed2g1805 263 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Aed2g1805 263 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Aed2g1805 263 Pfam AP2 domain 88 139 IPR001471 GO:0003700|GO:0006355
Aed2g1805 263 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 251 - -
Aed2g1805 263 MobiDBLite consensus disorder prediction 182 207 - -
Aed2g1805 263 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Aed2g1805 263 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Aed2g1805 263 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Aed2g1805 263 MobiDBLite consensus disorder prediction 1 66 - -
Aed2g1805 263 MobiDBLite consensus disorder prediction 67 89 - -
Aed2g1805 263 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1805 Aed-Chr2 22711535 22712644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1805 81 252 AP2-EREBP Transcription Factor Family AT2G44940 54.922 7.53e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g1805 AP2 5.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1805 - - gsj:114420351 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1805 2 22711535 22712644 Aed2g1805 2 22711535 22712644 ECH