Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1804 ATGTTTGGGCGTGGTGGACCAAGGAGGAGTGATAACTCCAAATATTATGATGTTCTCGGGGTTTCCAAAAATGCCAATGAAGATGAAATCAAGAAGGCCTATAGAAAGGCAGCTATGAAGAACCATCCAGATAAGGGAGGAGATCCTGAAAAGTTCAAGGAGTTAGGTCAAGCATATGAAGTTTTAAGTGATCCTGAGAAGAAAGAACTGTATGACCAGTATGGCGAAGATGCCCTTAAAGAAGGGATGGGGGGAGGAGGAGGATCGTTTCATAATCCATTTGATATATTTGAATCATTTTTTGGAGGATCTAGCTTTGGTGGTGGTGGTGGTAGTTCTCGAGGTAGAAGACATAAGCATGGTGAAGATGTTGTGCATTCTTTAAAGGTTTCCTTGGAGGATGTCTATAATGGCACAACGAAGAAACTATCTCTTTCTAGAAACGTATTATGCCCGAAATGTAAAGGGAAAGGTTCCAAAAGTGGAGCAGCTGGTAGGTGTTTTGGATGCCAAGGCACTGGTATGAAAATTACAAGAAGGCAGATTGGACTAGGCATGATTCAACAAATGCAACATGTCTGTCCTGACTGCAGAGGAACTGGTGAGGTCATTAACGAGAGAGATAGATGTCCTCCGTGCAAAGGAAACAAGGTTACCCAGGAAAAGAAGGTGCTAGAGGTGCATGTTGACAAGGGCATGCAGCAGGGCCAGAAGATTGTTTTTGAAGGACAAGCTGATGAAGCTCCTGACACAATCACAGGAAACATTGTTTTTGTATTGCAAGTAAAGGATCACCCAAGGTTCAGAAGGGAGCACGATGACCTTTTCATTGATCACAATCTCAGCTTAACCGAGGCACTCTGTGGCTTCCAGTTTGCCATCACTCATCTTGATGGTAGGCAACTATTGATCAAATCAAACCCTGGGGAAGTCATCAAGCCAGGCCAATATAAAGCAATAAATGATGAGGGAATGCCACAACACAGTAGGCCATTCATGAAGGGTCACCTTTACATCCAGTTCAATGTTGATTTCCCGGACTCAGGATTTATTTCCCCTGACCAATGCCAGCAATTGGAGAAGGTGTTACCTCAGAAGAGCAGCAAGCACGCATCAGACATGGAGCTGGATGATTGTGAGGAAACCACTCTGCATGATGTCAACTTCAAGGAGGAGATGAGACGAAAGCAGCAGCAACAGCAATACCGCGAGGCTTATGATGAAGAAGATGATGATGAGCCATCTGGTCACCGAGTGCAATGTGCTCAACAGTAG 1275 0.4439 MFGRGGPRRSDNSKYYDVLGVSKNANEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKKELYDQYGEDALKEGMGGGGGSFHNPFDIFESFFGGSSFGGGGGSSRGRRHKHGEDVVHSLKVSLEDVYNGTTKKLSLSRNVLCPKCKGKGSKSGAAGRCFGCQGTGMKITRRQIGLGMIQQMQHVCPDCRGTGEVINERDRCPPCKGNKVTQEKKVLEVHVDKGMQQGQKIVFEGQADEAPDTITGNIVFVLQVKDHPRFRREHDDLFIDHNLSLTEALCGFQFAITHLDGRQLLIKSNPGEVIKPGQYKAINDEGMPQHSRPFMKGHLYIQFNVDFPDSGFISPDQCQQLEKVLPQKSSKHASDMELDDCEETTLHDVNFKEEMRRKQQQQQYREAYDEEDDDEPSGHRVQCAQQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1804 424 Pfam DnaJ central domain 151 217 IPR001305 GO:0031072|GO:0051082
Aed2g1804 424 Hamap Chaperone protein DnaJ [dnaJ]. 11 396 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aed2g1804 424 SUPERFAMILY Chaperone J-domain 10 112 IPR036869 -
Aed2g1804 424 Gene3D - 113 264 - -
Aed2g1804 424 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 148 220 IPR036410 -
Aed2g1804 424 Pfam DnaJ domain 14 72 IPR001623 -
Aed2g1804 424 MobiDBLite consensus disorder prediction 390 424 - -
Aed2g1804 424 ProSiteProfiles dnaJ domain profile. 14 75 IPR001623 -
Aed2g1804 424 MobiDBLite consensus disorder prediction 390 404 - -
Aed2g1804 424 PRINTS DnaJ domain signature 47 67 IPR001623 -
Aed2g1804 424 PRINTS DnaJ domain signature 67 86 IPR001623 -
Aed2g1804 424 PRINTS DnaJ domain signature 16 34 IPR001623 -
Aed2g1804 424 SMART dnaj_3 13 67 IPR001623 -
Aed2g1804 424 Pfam DnaJ C terminal domain 125 346 IPR002939 -
Aed2g1804 424 CDD DnaJ_C 122 348 - -
Aed2g1804 424 Gene3D DnaJ domain 11 112 IPR036869 -
Aed2g1804 424 CDD DnaJ_zf 151 217 IPR001305 GO:0031072|GO:0051082
Aed2g1804 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 347 IPR008971 GO:0006457|GO:0051082
Aed2g1804 424 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Aed2g1804 424 Gene3D - 151 217 - -
Aed2g1804 424 Gene3D - 265 347 - -
Aed2g1804 424 ProSiteProfiles Zinc finger CR-type profile. 138 222 IPR001305 GO:0031072|GO:0051082
Aed2g1804 424 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 424 IPR044713 GO:0006457|GO:0030544
Aed2g1804 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 122 266 IPR008971 GO:0006457|GO:0051082
Aed2g1804 424 CDD DnaJ 15 64 IPR001623 -
Aed2g1804 424 PANTHER CHAPERONE PROTEIN DNAJ A6 8 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1804 Aed-Chr2 22684242 22688603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1804 9 74 C2H2 Transcription Factor Family AT1G74250 44.000 1.03e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1804 K09503 - gmx:100812236 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1804 2 22684242 22688603 Aed2g1804 2 22684242 22688603 ECH