Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1787 ATGTCCCTCCTCCAGCGCCATGTTTGCAGCACCACAAAGCTCTCAACAACGATCCCTTGGAGGTACAAGAAGTTCGCCATAACACAGGGCCAGAAGTCCCTCACCGATTACCTCCACGCCACGCGCTGCATCCCTTACCCCTTCGCCGACCAAATCGCGAGAAACTCCCTCACTTCCCTCATCACCCTCATCACCAATCTCGGTTCTTTCTCCCCTACCCACTTCCCCCACAACCTCAACAAGTTCCTCAGCTACCACCCCATCAACGAATTCGAGTTCTTCTTCGAAAGCATCGGCATTCACCCCTCCAAGTTCCCATCTTTGCTCCCCCAGAACAAGTTCTTCTTCTCAGAAGATGGGACCCTCTTGGATGCTGCTTGTGTTCTCCATGAATTCGGGTTCCCCTGGGACAGCCTTGGGGTTCTGTATATGGAGAGTGGCTGTGTCTTCAAGTGGGGTGCTTCTGAGTTGAAGGGTAGGCTCTGTGGCTTCAAAAGGTACGGTTTTTGCAATGTTCAGGTTGTGGGGATATGTTTGGCTTTTCCCTTTGTGTTCAGTGGCCAAAAGGGTGCTGAGGTTGTTGATGCTTTGTTTGGTGATTTGAGGTTGCTGTTTGGGGAGTGTGGTTTGGCTGAGTGTGTTGAGGGGAAGGGGAATACTGTGGATGATTGGGTTCGGGTGTGTAGGAAGATAAGGTTGTTTTATGATTTGAATGGTGGGAGGAGCATAGCGGTGCTCGTTGGAGGGAACAGTGGTGTTGGTGTAGGTGCCATTGTGGAGCATGGGGAAGAGGAGTTGGTTCAAGCAACTGAGTATTTTTGTAGGTTTGGTGCGAGGAAGGAGGACGTGGCACGGTTGATTGTAAATGGACCGGAGTTGTTGGAGCTTGATTTGGAGACACGGGTGGTTGATGTGGTGAAGCTGTTGGAATACTTTGGAATGAGCTCTGATGATGTTGAGGATGTTAGGAGGGATTATGCTCATATGTTGGGGACAGTTAGGATGGGTAATCTACCCAATGTGATGAGGGCTTTGGGTTTACATGAGTGGTTCTTTGATAAGATCAAGGATGGTAATCATCAGTTGTTGGCTAGTTTTGTTGTGAGCTATCCCGATGAAGTCCAGGATGAAGGCTATCTGGGTCGTTTGAAGGCGATTCAGGCGACAAGAAACCCGACTCACAATATGAGCAAGTTGAACTTCTTGCATGCCATTGGCTTTGGCGAAAATGCTTTGACTATGAATGTGTATGCTCAGATGCACGGAGCAAGTGGTGAGTTACAAAAGAGATTTGATTGCCTTCTACATCTCGGGATTGAGTTTTCGAAGGTCTGTAAGATGATCACGATTCATCCTAAGATTCTTAGCCAGAACCCTCAAAATTTAGAGCGTAAGGTTCATTTCTTTTGTCAGGAAATGGGACACTCACTAGAACATTTGGTGACTTTTCCAGCATTCTTGTGCTTTGACTTGGAGAACCGCATTAAGCCTAGGTATAGGTTCCATATGTGGGTTATGGAAAAGGGTCTGTCTTCCAAAAATTATTCCATTGCAAGTATGGTTGCAACAAGCAACAGGAATTTTGTTGCTCGCGCTTCTAAAATTCACCCAGCTGCTCCGAAACATTGGTTTGAGCAATTCTATCCTAGAATTTTCCCAGTGTGA 1665 0.4727 MSLLQRHVCSTTKLSTTIPWRYKKFAITQGQKSLTDYLHATRCIPYPFADQIARNSLTSLITLITNLGSFSPTHFPHNLNKFLSYHPINEFEFFFESIGIHPSKFPSLLPQNKFFFSEDGTLLDAACVLHEFGFPWDSLGVLYMESGCVFKWGASELKGRLCGFKRYGFCNVQVVGICLAFPFVFSGQKGAEVVDALFGDLRLLFGECGLAECVEGKGNTVDDWVRVCRKIRLFYDLNGGRSIAVLVGGNSGVGVGAIVEHGEEELVQATEYFCRFGARKEDVARLIVNGPELLELDLETRVVDVVKLLEYFGMSSDDVEDVRRDYAHMLGTVRMGNLPNVMRALGLHEWFFDKIKDGNHQLLASFVVSYPDEVQDEGYLGRLKAIQATRNPTHNMSKLNFLHAIGFGENALTMNVYAQMHGASGELQKRFDCLLHLGIEFSKVCKMITIHPKILSQNPQNLERKVHFFCQEMGHSLEHLVTFPAFLCFDLENRIKPRYRFHMWVMEKGLSSKNYSIASMVATSNRNFVARASKIHPAAPKHWFEQFYPRIFPV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1787 554 Pfam mTERF 262 331 IPR003690 GO:0003690|GO:0006355
Aed2g1787 554 Pfam mTERF 397 528 IPR003690 GO:0003690|GO:0006355
Aed2g1787 554 SMART mt_12 445 476 IPR003690 GO:0003690|GO:0006355
Aed2g1787 554 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Aed2g1787 554 SMART mt_12 477 511 IPR003690 GO:0003690|GO:0006355
Aed2g1787 554 PANTHER CGI-12 PROTEIN-RELATED 15 547 IPR003690 GO:0003690|GO:0006355
Aed2g1787 554 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 15 547 - -
Aed2g1787 554 Gene3D Transcription termination factor 3, mitochondrial 260 547 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1787 Aed-Chr2 22523725 22525389 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed2g1787 mTERF 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1787 - - gmx:100812245 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1787 2 22523725 22525389 Aed2g1787 2 22523725 22525389 ECH