Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1775 ATGGGAGAGGGGTCTGTGGAACTTGAGGCTATTGTAAAGGAAGCTGTTGATCTGGAGAACATTCCTCTTGAGGAGGTTTTTGATAATCTCAAATGCACAAGAGAAGGTTTAAGCTCCGAGCAAGTACAACAAAGGCTAGACTTGTTTGGATACAATAAGCTTGAAGAAAAAAAGGAAAGTAAGGTATTGAAGTTTTTGGGGTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATAGCCATGGCACATGGAGGGTCTGCTCTTACTGGAGAGTCACTTCCTGTGAGCAAACATCCTGGAGAAGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCAGTAGTTATTGCAACTGGAGTTCACACCTTTTTTGGGAAGGCAGCTCATCTTGTGGAAAACACAACACATGTTGGACATTTCCAAAAGTTTGCTGTTCGTTATGCACTAAGTGGAAAGGCTTGGAATACAGTGATAAACCAAAGGGTGAGTACTATGACTGAACCTGTGATAAAACTTCAGCAAAAGATTGTGTAG 561 0.4225 MGEGSVELEAIVKEAVDLENIPLEEVFDNLKCTREGLSSEQVQQRLDLFGYNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAMAHGGSALTGESLPVSKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKFAVRYALSGKAWNTVINQRVSTMTEPVIKLQQKIV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1775 186 Pfam E1-E2 ATPase 92 156 - -
Aed2g1775 186 Gene3D - 91 127 - -
Aed2g1775 186 Gene3D - 128 166 - -
Aed2g1775 186 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Aed2g1775 186 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Aed2g1775 186 PANTHER CALCIUM-TRANSPORTING ATPASE 4 91 - -
Aed2g1775 186 PANTHER PLASMA MEMBRANE ATPASE 92 151 - -
Aed2g1775 186 PANTHER PLASMA MEMBRANE ATPASE 4 91 - -
Aed2g1775 186 PANTHER CALCIUM-TRANSPORTING ATPASE 92 151 - -
Aed2g1775 186 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 88 IPR023298 -
Aed2g1775 186 SUPERFAMILY Calcium ATPase, transduction domain A 92 140 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1775 Aed-Chr2 22442715 22449612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1775 8 91 Primary Pumps ATPases AT3G60330 77.381 9.12e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1775 K01535 - cpap:110811448 197.208