Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1774 ATGAATTTCAACACCACTCTTGAATCCGATGATTTTGCTCTTCTAGAATCTATTCAACGTTATCTCCTCGACGATAACCAAGACTTCAACGCTTTAACGGAGATCCTGGCAACACCTAACGGTAGCGAATCAACGTCCACCCATTACGTCAATGCCGTCAACTCGCCGGTACCTTCGTCGGGACAAACAGCAACGGCTTCCACGGAGGCGCGTGGGGCTTCGTCTGCGGCTGCGCGTGGTGGTCACGCGCGTAACCAGAATTACATGGGTGTGAGGCGTAGGCCTTGGGGGAAGTTTGCGGCTGAGATAAGGGACCCAAATAAGAACGGCGCGAGAGTGTGGCTCGGGACTTTTGAGACGGCTGAGGATGCGGCTTTAGCTTATGACCGAGCTGCTTTTAAAATGCGCGGCTCGAAGGCTAAGCTCAACTTTCCTCATTTAATTGGGTGCAGTGATGCTGAGACAAGCCGAAGACAGTAA 480 0.5208 MNFNTTLESDDFALLESIQRYLLDDNQDFNALTEILATPNGSESTSTHYVNAVNSPVPSSGQTATASTEARGASSAAARGGHARNQNYMGVRRRPWGKFAAEIRDPNKNGARVWLGTFETAEDAALAYDRAAFKMRGSKAKLNFPHLIGCSDAETSRRQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1774 159 Gene3D AP2/ERF domain 86 146 IPR036955 GO:0003700|GO:0006355
Aed2g1774 159 MobiDBLite consensus disorder prediction 55 89 - -
Aed2g1774 159 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Aed2g1774 159 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Aed2g1774 159 SUPERFAMILY DNA-binding domain 88 146 IPR016177 GO:0003677
Aed2g1774 159 ProSiteProfiles AP2/ERF domain profile. 87 145 IPR001471 GO:0003700|GO:0006355
Aed2g1774 159 PANTHER DNA-BINDING DOMAIN 47 150 IPR044808 GO:0003700|GO:0009873
Aed2g1774 159 MobiDBLite consensus disorder prediction 55 72 - -
Aed2g1774 159 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 47 150 - -
Aed2g1774 159 SMART rav1_2 87 151 IPR001471 GO:0003700|GO:0006355
Aed2g1774 159 Pfam AP2 domain 87 137 IPR001471 GO:0003700|GO:0006355
Aed2g1774 159 CDD AP2 86 147 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1774 Aed-Chr2 22436157 22436636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1774 51 157 AP2-EREBP Transcription Factor Family AT2G44840 61.818 1.82e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g1774 AP2 1.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1774 K09286 - gmx:100806359 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1774 2 22436157 22436636 Aed2g1774 2 22436157 22436636 ECH