Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1773 ATGGCCACCACAATATCTTGTGATTTCTCTTCATTGGAATCTATGCAACACTATCTTCTTGAGCTTGAACACGATTCCAACACTCTCATGAACGTTTCCAACCACGAAATTTGCTATTCTCTATCCCACAATCTATTCCCAAGCCCTACTTTCACCTTGGAGGGTGTCCATGATGCAAATGATTCATTGTTGGCATGCAAAATAGAACACCCTACGGTGGTGCCTGAAGTTCACGCACCACCGGTGTGGAAGCGCTACCGGGGCGTGAGGCGAAGACCTTGGGGCAAGTTCGCAGCAGAGATAAGGGACCCAAAGAAGAATGGTGCAAGGATTTGGCTTGGGACTTATGAAACTGAAGAAGAAGCAGGTTTAGCTTATGATAGAGCTGCTTTCAAGATGCGAGAAAGCAAAGCTAAGTTAAATTTTCCTCATCTTATTGGCTCTCACGCGCCTCTGAAGTCGGTGAAAACAACAAAAACTCTGAATCAAAACTCGTCAAAATCTTGTTCATCGTATTCACCTACTTCAGAGACACAGAGGTCAAAGAAGAGGAAAAATTTGGCTGACCTCTTGAACAGGTTGGCCAAGAATAGAAGACAGGTGAAGATGTTTGAAATGGATTTGATTACATGCAAATGA 639 0.4366 MATTISCDFSSLESMQHYLLELEHDSNTLMNVSNHEICYSLSHNLFPSPTFTLEGVHDANDSLLACKIEHPTVVPEVHAPPVWKRYRGVRRRPWGKFAAEIRDPKKNGARIWLGTYETEEEAGLAYDRAAFKMRESKAKLNFPHLIGSHAPLKSVKTTKTLNQNSSKSCSSYSPTSETQRSKKRKNLADLLNRLAKNRRQVKMFEMDLITCK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1773 212 Pfam AP2 domain 85 135 IPR001471 GO:0003700|GO:0006355
Aed2g1773 212 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700|GO:0006355
Aed2g1773 212 Gene3D AP2/ERF domain 84 144 IPR036955 GO:0003700|GO:0006355
Aed2g1773 212 Coils Coil 180 200 - -
Aed2g1773 212 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 1 199 - -
Aed2g1773 212 MobiDBLite consensus disorder prediction 158 183 - -
Aed2g1773 212 SUPERFAMILY DNA-binding domain 85 144 IPR016177 GO:0003677
Aed2g1773 212 MobiDBLite consensus disorder prediction 158 177 - -
Aed2g1773 212 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Aed2g1773 212 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Aed2g1773 212 SMART rav1_2 85 149 IPR001471 GO:0003700|GO:0006355
Aed2g1773 212 PANTHER DNA-BINDING DOMAIN 1 199 IPR044808 GO:0003700|GO:0009873
Aed2g1773 212 CDD AP2 84 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1773 Aed-Chr2 22432201 22432839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1773 85 148 AP2-EREBP Transcription Factor Family AT2G44840 85.938 3.55e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g1773 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1773 K09286 - gmx:100527194 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1773 2 22432201 22432839 Aed2g1773 2 22432201 22432839 ECH