Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1772 ATGGCTACTACAAAAGCTTGTGATTATTCTTCGTTGGAATCTCTTCAACACTATGATCTGCTTGAACGTGATTCCAAACACTCGGGCTCTAGTGGCGTGAAGAGTATCCATGATGCCAAGAAATTGTCTGAAGCTCACACACCACCATCCGAATGGAAGCACTACCGTGGCGTGAGGGACCCAAAGAAGAACAGTGCTAGGGTTTGGCTTGGGACTTATTTGACCGAAGAAGAAGCAAGTTTGGCTTATGATAGAGTTGTTTTTAGGATACATGGCAAAAAAGCTAAACTAAACTTTTCCTCACCTCATTGA 312 0.4327 MATTKACDYSSLESLQHYDLLERDSKHSGSSGVKSIHDAKKLSEAHTPPSEWKHYRGVRDPKKNSARVWLGTYLTEEEASLAYDRVVFRIHGKKAKLNFSSPH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1772 103 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 1 100 - -
Aed2g1772 103 SUPERFAMILY DNA-binding domain 54 100 IPR016177 GO:0003677
Aed2g1772 103 SMART rav1_2 54 103 IPR001471 GO:0003700|GO:0006355
Aed2g1772 103 MobiDBLite consensus disorder prediction 24 58 - -
Aed2g1772 103 ProSiteProfiles AP2/ERF domain profile. 29 100 IPR001471 GO:0003700|GO:0006355
Aed2g1772 103 PANTHER DNA-BINDING DOMAIN 1 100 IPR044808 GO:0003700|GO:0009873
Aed2g1772 103 CDD AP2 53 99 IPR001471 GO:0003700|GO:0006355
Aed2g1772 103 Gene3D AP2/ERF domain 50 101 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1772 Aed-Chr2 22428916 22429263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1772 39 103 AP2-EREBP Transcription Factor Family AT2G44840 51.948 1.75e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1772 K09286 - gmx:100793710 134.806