Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1771 ATGGAAACTAATGCAATATATTGCGATCTTTCTCCATTGGAATCTGTTCAACACTATCTGAACCTTGATCTTGAACATGATTCCAACACTCTCTCCAACTTTTCCAACCACGAAATCCCAAAGGGTTTGGGATCATGCAAAAGTGACCAACAACAGCCCGTGGAGGCGCGTGAGATGCACGCGCCTCCGGTGTGGAAGCACTGCCGAGGCGTGAGGCGGAGGCCGTGGGGGAAGTTCGCGGCAGAGATATGGGACCCAAAGAGAAACAGCCGGAGGGTTTGGCTCGGAACCTATGAGACGGAAGAAGAAGCAGGCTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTAGCAAAGCCAAGTTGAATTTTCCTCACCTCATTAGCAAGCACGTGTCTCTGGAGCCGGTGAGAATCACGAAGGCCGCAAGGCAAAATTCTTTGCCGAAGCCGCCTGAACCGTCGTCGTTATCTCCGGCTCCAGAGACACCAGAAGGGTTGTCGCCGACAAAGAAGAGGAAGAAGTTGGCTGATTTGTTGAACAGGTTGGCCAGGAGTAGAAGCCATGTGAAGGTGTTTGAAATGGGTTCACATGCCAACTAA 603 0.5091 METNAIYCDLSPLESVQHYLNLDLEHDSNTLSNFSNHEIPKGLGSCKSDQQQPVEAREMHAPPVWKHCRGVRRRPWGKFAAEIWDPKRNSRRVWLGTYETEEEAGLAYDRAAFKMRGSKAKLNFPHLISKHVSLEPVRITKAARQNSLPKPPEPSSLSPAPETPEGLSPTKKRKKLADLLNRLARSRSHVKVFEMGSHAN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1771 200 Gene3D AP2/ERF domain 67 126 IPR036955 GO:0003700|GO:0006355
Aed2g1771 200 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677
Aed2g1771 200 PRINTS Ethylene responsive element binding protein signature 107 127 IPR001471 GO:0003700|GO:0006355
Aed2g1771 200 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Aed2g1771 200 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 8 189 - -
Aed2g1771 200 Pfam AP2 domain 68 117 IPR001471 GO:0003700|GO:0006355
Aed2g1771 200 ProSiteProfiles AP2/ERF domain profile. 67 125 IPR001471 GO:0003700|GO:0006355
Aed2g1771 200 PANTHER DNA-BINDING DOMAIN 8 189 IPR044808 GO:0003700|GO:0009873
Aed2g1771 200 MobiDBLite consensus disorder prediction 143 174 - -
Aed2g1771 200 CDD AP2 69 127 IPR001471 GO:0003700|GO:0006355
Aed2g1771 200 SMART rav1_2 67 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1771 Aed-Chr2 22425046 22425648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1771 69 178 AP2-EREBP Transcription Factor Family AT2G44840 57.273 3.40e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed2g1771 AP2 9.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1771 K09286 - gmx:100793895 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1771 2 22425046 22425648 Aed3g0450 3 3187488 3188111 PCT