Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1768 ATGACGGAGAACTGGGCGGAGCTGCCGTTGAAGGAGGACGACCCCGAAGACATGGTTATCTACGGTGTTTTGCGCGAGGCCGCCGCCATCACCGGATGGCTCCCTGCTTCCAACGGCAATGGGGCGAGCAACGTTGGTGCAGCCGTGAAAATGGAAAATGAGTGTCAAAATAGTAGTGCCTCAGCAGCTGCGCGTGGCACTCACGCGCCTCCAAGGAAGGGTTTGAGCTACCGTGGTGTGCGGAGGAGGCCGTGGGGAAAGTATGCGGCCGAGATAAGAGATGCTAAGAGGAATGGCGTGAGAGTGTGGCTTGGGACCTACAAAATTGCTGAGGATGCAGCTTTGGCTTACGATCGAGCCGCATTTAAGATGCACGGTTCGAAAGCAAAGCTGAATTTTCCTCATTTAATCGGCTCAGATCATCATATCGAGCCGATTAGGGTTACGTTAAAGAAACGTTCATCGGATTATGATGATCATGCATTTGACGAAAGACAGAAGTCAATAGATCTGCATATATAA 522 0.5134 MTENWAELPLKEDDPEDMVIYGVLREAAAITGWLPASNGNGASNVGAAVKMENECQNSSASAAARGTHAPPRKGLSYRGVRRRPWGKYAAEIRDAKRNGVRVWLGTYKIAEDAALAYDRAAFKMHGSKAKLNFPHLIGSDHHIEPIRVTLKKRSSDYDDHAFDERQKSIDLHI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1768 173 ProSiteProfiles AP2/ERF domain profile. 76 134 IPR001471 GO:0003700|GO:0006355
Aed2g1768 173 Gene3D AP2/ERF domain 76 135 IPR036955 GO:0003700|GO:0006355
Aed2g1768 173 PANTHER DNA-BINDING DOMAIN 2 157 IPR044808 GO:0003700|GO:0009873
Aed2g1768 173 PANTHER BNAC04G53270D PROTEIN 2 157 - -
Aed2g1768 173 Pfam AP2 domain 77 126 IPR001471 GO:0003700|GO:0006355
Aed2g1768 173 SMART rav1_2 76 140 IPR001471 GO:0003700|GO:0006355
Aed2g1768 173 CDD AP2 77 136 IPR001471 GO:0003700|GO:0006355
Aed2g1768 173 PRINTS Ethylene responsive element binding protein signature 116 136 IPR001471 GO:0003700|GO:0006355
Aed2g1768 173 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Aed2g1768 173 SUPERFAMILY DNA-binding domain 77 135 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1768 Aed-Chr2 22401947 22402765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1768 1 154 AP2-EREBP Transcription Factor Family AT2G44840 54.545 2.34e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed2g1768 AP2 7.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1768 K09286 - gmx:100804762 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1768 2 22401947 22402765 Aed2g1768 2 22401947 22402765 ECH