Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1745 ATGGGATTTTACTTGGGCGTGCAGAGTTTTGCTGATACTGCAGAGGCTCTAATGAGGGGAAATTTCCCTGTAATAAAATTTGAACCACAAAACATAGGTAACAGGAATTTTGTATTCCCCTTGCGTATTTATAAAAATGAAGAGTGTTCAGGCTGTCCAATGCCATATTTTGAACAAAGGGAAGCCAATAATGATGCCAGCACAACCATGTCAAATGGAGAGGTTGCTAAATCTATTATCAAAGCAAGTTATTTAAACTGTCCAAGGCTAGTGGACATAAATAGATTCATGAAATGTAATCTCTTAGTTGACCGTGCTCTCTTGGATTCCTCATTATACAAAGATGGAATTGTTAATAGCCTTGTATGTGAGAAGAAAATGGATTATTTTGACACATTTATGCATGACTGTACTGAACAAAACAGTATTCATCATGTGGATGAAGATGATATTGGTGAAAGTAATACTTGCAAAGATCAACCAAAAGAACCTAATGAAGATGATGAGGTGGAAAGTGGTTCAAAGAAAGGGCTGATTGATTCTGGCACAAATAGAGACAAGGAAGATGTTGCTCAGAGGGTCAATGCTGCACTATGTGGAGAAGAATTGACTAATGGTTTGGAACAAAAGAACCGTGTCCATGTAATGAATTTGGAAAAGGAGAGTGAGAGAAACACAGGGACTGAGTCTACTAATAAAATAGCCAATTCCCCTTCACCTCCAAAGCGGCCTTTGAAATCTTCTAGCATATTAAAGGGAGGACAGAAGAATGATCTACACCCTAAGTCACAAATTCTTAAAGAGTCATTACAAGCCAGTAATAAATTTGGTTATGTTCCAAAAAATGTTGATCAATGTAAAAATGATCAGAAGCTTACAGTGAGGAAGCAAAATCATAAAGAGAACATGGCAGGAAATATTGCCACTACTACTAAGGTGGAGAAAAGAGCCTATCCATCATTTGAAGCTTTTACAGTAGAGGAAGAGGAAGGTTCAGGTGGCTATGGCACCGTTTACCGTGCTAAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTAAATAATGAACGGAGTATGCTCGAGCGTTTTGGTGGTAAAAACTTCATAATAAGGTATGAGGGCTCTTTAAAATATGACAACAGCAACTGCTTTGTTTTAGAACATGTTGACCATGATAGACCCGAGGTTTTGAAAAAAGAAATTGATGTAGTTCAACTTCAATGGTACGGGTATTGCATGTTCAGGGCCCTTTATTGCTTGCACAAAGAGGGAGTTGTTCACAGAGACGTTAAGCCTGGAAACTTCCTTTTCTCTCGAAAACTAAGCAAAGGCTACCTAATTGACTTCAATCTTGCCATGGATTTAAAGCAGAAGCACAACGTTGGAATTAAGTTTAGCCAATTGTGCATCTGTTCAGGTAAATCAAAACCTAGCCTCGATGCATTACCCAATCACGGTTCTCTCTCTGGTTCTGCCACTTTCCGAGACAAGAACCTTGGAGGCAACAAGTCTTTAACATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTCATAGGATTGTAAAGCAAAAGCCTTATACCGGTCCTCTGAAAAATTGTCCTGATAAGGCTGGTGGGAGTTTTCTCAGAGCACAAGGAACAGATGGCTCTGAGATGCTATTTTGCCGTCCTATAATTAATGTTCTACCTTTTCTTCAGGTTTTGTTAAGGTCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGAGTCACTCTACTCTACATGGTGATCGGGAAGAGTCCTTTCACTGGTGACCCAGACCAGAATATAAAAGAAATTTCTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAATTATCCTTTCCTCTGTTTCATGCACTATTAAACTCTTTAACCAGTGTCTGTCTCGCTAGAGATTATTGGTTAAACTTTAAAGTCCAGTTGTATAGTGAGTTACTTGACGAGCGATACTTACAGTCATTGAACATAGAAACCTGGTGTAAGATTCACACAAAGAGACCAGAGTTTCTTGAGCAGATCCCAAAATCATTGTTCGATTTGATAGACAAGTGTCTAACAGTTAACCCGAGAAATAGGCTTAGTGCTGAAGAAGTTCTAAGACATGAATTCTTTGACTCAGTGCACTTGTCCCTGAGGAAGCAAAGGATGATTCAACGAGCTCTAAGATCAGACGCTGCAGCTTCCAGAGCAATCTGA 2289 0.3923 MGFYLGVQSFADTAEALMRGNFPVIKFEPQNIGNRNFVFPLRIYKNEECSGCPMPYFEQREANNDASTTMSNGEVAKSIIKASYLNCPRLVDINRFMKCNLLVDRALLDSSLYKDGIVNSLVCEKKMDYFDTFMHDCTEQNSIHHVDEDDIGESNTCKDQPKEPNEDDEVESGSKKGLIDSGTNRDKEDVAQRVNAALCGEELTNGLEQKNRVHVMNLEKESERNTGTESTNKIANSPSPPKRPLKSSSILKGGQKNDLHPKSQILKESLQASNKFGYVPKNVDQCKNDQKLTVRKQNHKENMAGNIATTTKVEKRAYPSFEAFTVEEEEGSGGYGTVYRAKRTTDGKRVAIKCPHSNAHKNHVNNERSMLERFGGKNFIIRYEGSLKYDNSNCFVLEHVDHDRPEVLKKEIDVVQLQWYGYCMFRALYCLHKEGVVHRDVKPGNFLFSRKLSKGYLIDFNLAMDLKQKHNVGIKFSQLCICSGKSKPSLDALPNHGSLSGSATFRDKNLGGNKSLTSNKRALADYKNYSELHRIVKQKPYTGPLKNCPDKAGGSFLRAQGTDGSEMLFCRPIINVLPFLQVLLRSQHQGHKIDIWSAGVTLLYMVIGKSPFTGDPDQNIKEISKLRGSEEFWEVAKLHDRELSFPLFHALLNSLTSVCLARDYWLNFKVQLYSELLDERYLQSLNIETWCKIHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEEVLRHEFFDSVHLSLRKQRMIQRALRSDAAASRAI 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1745 762 Gene3D Transferase(Phosphotransferase) domain 1 578 757 - -
Aed2g1745 762 MobiDBLite consensus disorder prediction 228 254 - -
Aed2g1745 762 MobiDBLite consensus disorder prediction 213 227 - -
Aed2g1745 762 ProSiteProfiles Protein kinase domain profile. 324 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1745 762 PANTHER CASEIN KINASE-RELATED 287 746 - -
Aed2g1745 762 MobiDBLite consensus disorder prediction 210 259 - -
Aed2g1745 762 Pfam Protein kinase domain 325 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1745 762 Pfam Protein kinase domain 584 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1745 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Aed2g1745 762 SMART serkin_6 324 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1745 762 SUPERFAMILY Protein kinase-like (PK-like) 323 749 IPR011009 -
Aed2g1745 762 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 287 746 - -
Aed2g1745 762 Gene3D Transferase(Phosphotransferase) domain 1 284 481 - -
Aed2g1745 762 MobiDBLite consensus disorder prediction 144 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1745 Aed-Chr2 22065003 22069514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1745 315 463 Core Cell Cycle Gene Families AT1G20930 32.353 1.70e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Aed2g1745 Pkinase 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1745 K02214 - gmx:100795742 920.228