Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1712 ATGTCCTTCAATCAATCAAAGGCGGAGAAGAACGACGCGGTTTACCGAAAAACCGGGCGATCCTCTAGCTTCAATCAGCCGAGAGGTTCCTACGGCAGAGGTGGCGGCGGCGGTGGCGGGACCGCGCCGTTGAGCAATTCACTCCCCTCTAACCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAAGCTAAACCCCCCAGGGCATTTAACAGAGTCCAATAGCGCATCTACTGCCCGAATCATTAACAATGGTACCCATGTACAGCCACAATTACATGGAGCATCAGATGGGCCAGTTACAAAGTCATCTGAATCAGCAGCTGCACATAGGAGTGCTGGAATTCTTCCTAAAGCTCCAACTTCTCTACGGCCCCCCTTGATTTCAGATCCAATCCTTCCCACAAGCTCTGCTAAGGGAGATGCATCTAAGGCATTCCCTTTTCAATTTGGATCCATTGCTCCTGGCTTTGTTAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCTTCATGACTCTTACAAATCTGTGCCTTCGGTGCCAGTTCCTCCTGTTCCAAAGCAGCAGCAATCTCCTAGGAAAGATGCTGGTGTCACTGAGCAATCTAACGCCGGGGAGAGTCATATAGGGGGAACTAAGGCAAAAAAGGATTCTCAGGTGTCACCTTTGACCCCAACAAGCCAGATGCCAAAGCCCTCTGTTCCTGTAACTGGGATTTCAATGTCAACTCCATATCACCAGTCACAGGCTCCTTTACAGTTTGGCGGTGCTAATCCACAGATTCAATCTCAGGGTATGTCAACGGCATCCCTCCCGATGCCTATACCGATGCCTCTACCAATTGGCAATGCTACACAAGTGCAACAGCCAGTTTTTGTTCCAGGTCTTCAACCTCATCCAATGCATCCTCAGGGGATCATGCATCAAGGTCAAAACATGACTTTTGCTCCTCAAATGGGTCATCAATTGCCCCATCAGTTAGGCAGCATGGGCATTGGCATCGGCCCTCAATATCCCCAGCAGCAAGGAGGAAAATTTGCTGGTCCTCGAAAAGCAACTACTGTTAAGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTTGATAAAAGAACAGATGCATATTCAGATGGTGGGTCATCTGGGGCTAGGTCACATCCTAACATACCTTCTCAACCCCAACCTGTTAAATCTTTTCCATCTTCTCATCCTGTGAACTATTACTCTTCCAGCTCAAATAATACCAATTCTCTCTACTATCCACCTAATTCTCTTCCATTAACTGGTAGCCTGATATCAGTTAATTCTCAGCCACCAATGTTTAATTATCCTGTGAACCATGGTCCACAGGGTGCAAATTTTATGAATTCATCAATGCTTGGTTCCCTGCCTATTAATAAAGCTAGCACTCCAACAGGGGCTGCGTCTCTAAGCATTAAGCCAGGTGGTACGTCTGCTATTGTGGATGAAAATGGAGAATCCCCTAGTTCAACAGTATCTTGTGATGGTAGCTGCTCTTCAGAAATCTCTTTACAGCAGTCTAAGTTGTCTAGTGATTCTGTCCCAGTTGTGTCTATTAATGAAGGAGGGAGGGAATCTCTTAGTAGGTCCAACTCTATGAAGGATAAGAAACCAGGGAAGAAAGGTCAATTATCACAGCATCAGGTTTCTGTACAATCTCCCACAGCAGATAATGTGCCTTCTCGTGCTGTTGATCATGGTATATCTGATGCTGGTGTTTCGAAACCTGTAGGAACTAAAACAAACCATTCTGCTGCAATTACATCTGAAGATCTTCCAACATCTGATACAATACCTAGTAGCATTTCTACTGCTGTTGAAGTGAAAACCAATGGGTCTGCTGAAGTTTCTGCTTGTGTTTCAGCTGAAGGATCTGGTGCACAAACTGGTGACAGAGTGCACAATCATAATCCTGGTAAGATAGATAAATTGGCTGAAGGAAATTTTGGCACATCAGATCTGAAGTCTGTTGATCTTCCAGAAACAAATCTCAAGGTTGGCTCAGAGAATACTGGCGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGCAAAAACTACCACTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAAGCTGTCTTAAGTTCTGAGAGCCTAGAAAGTGCTACTACATCTCCAAGTTTGAAGCAGTTACCAAAAGATGCTGCTAAGTCAGATGCTTTAGCAAGTGAAAAATGTGGTCACAGTAAAGCTGAAATTGATGACTGGGAGGATGCTGCTGATATGTCTACCTCCAAACTGGAGGTTCATGATAAATCTCAAGAAGTTGGTGATGGAAGTGTAAATACAGCCAAAAAGTATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTGCATGGATCTTCCTGAAGGTTTTGAAGTCACCCCAGACATTGAATCTTTGATGAGTGCCAATTTTGGTAATTCTCATGTTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAATTGTAGATAGGCCAGGTGGGATGTCTCGGATGGATCGCCGTGGGGAAATGGTAATGGAGGATGACAGATGGAATAAAGTTTCTGGTGCTTATCGTTCTGGACGTGGTATGGATGGCATTGGAGGTAATGTGGGAGTTCGATCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAGACACCACCACAATATGCTGGAGGGATCCTTTCTGGGCCAATGCAATCGGTGGGAAATCATGGTGGAAGAAATAACCCCGATGGGGAGAGGTGGCAGCGATCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACCCAAACTCCTTTACAGATTATGCACAAAGCTGATAATAAGTATGAAGTGGGTAAAGTAACAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACTCCACAGAATTTCGATAGACTTTTTGAACAGGTGAAAGCAGTTAATATTGACAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAACCTACCTTTTGTGAAATGTATGCCAACTTCTGTTTACATCTGGCTTCTGAGTTGCCTGATTTTAGCGAGGACAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAGGAGGAATTTGAGCGGGGTGAAAGAGAGGAAGAAGAAGCAAATAAGGCTGACGAGGGTGAGGTTAAGCAGTCTGCTGAGGAAAGGGAACAAAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACGGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAAGAAGACCTTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAGATTATTATCAAACAACATGAATTTATCTTCTAGGGTAAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAGAGGAGAAAAGTAGAAGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCCGCTCAGGAGAGGCAGGCCCAAGCTGGTAGGCCGGGTCGTGGTCTTGGCAACAATCAATCAGCTAGAAGGAATCCCATGGATTTTGGTCCAAGAGGATCTTCTATGCTGTCTACTCCCAATTCTCAAATGGGTGGACCGCGTGGTCTTCCTACTCAAGTCCGTGGGTATGGTGCTTCTCAGGATGCTCGATTTGAGGAACGGCAATCTTATGAGGCTAGGACCTTGTCGGTAACCTTGCCTCAAAGATCCTTAGGAGATGATTCTATAACCTTGGTACCCCAAGGTGGTCTTGCCAGGGGAATGTCTACAAGAGGATCAACTGCAATTTCCAATTTGCCAATATCTGATGTGCTTCCTGTTCCTGGAGACTCTCATAGAATGAGTACAGGTCTTAATGGTCACAGCAATTTATCAGAGTGCACACCACATAGCTCAAGGGAGGATCATGTGTCAAGATATTCAGGTCCATCTGCTTATGATCAATCAAGTCTTGCAGAGCGTAATGTAAACCATGGTAACCAAGACTCAAGGAGTTCACATCGGAATCTTGAACCTCATGCTCAATTGCAAGGGTCAACAGTCTCTCAGAATGCTTCTCCAGAGAAGATATGGCCAGAAGAACGACTGAGGGACATGTCCTTGTCAGCAATAAGAGAATACTACAGTGCTAGAGATGTGAACGAACTTGCTTTATGTGTCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCCATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACCGAAAGAGATCTTTTGGCCAAACTACTCGTCAACCTTGTGACATCTCAGCATGGCACATTGAGTCAAGTCCACCTCATCAAAGGGTTTGAATCTGTTCTCAGTACATTGGAGGATGCCGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTCGGCCAGATTTTTGCAAAAGCCCTAACAGAGAGTGTAGTCACTTTGAAGGAGATTGGGCAGTTAATTCATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTCTCAGCTGATGTTCTTGGAAGCACTTTGGAGATGATTCAAAGTGAGAAGGGTGATGCTTTTCTAAAAGAGATTCGTTCAAGCTCTAACCTGGAGTTGGAAACTTTCCGGCCACCTAATGCTAAAACATCAAGGAAGTTGGAAAAATTTATTTAG 4953 0.4432 MSFNQSKAEKNDAVYRKTGRSSSFNQPRGSYGRGGGGGGGTAPLSNSLPSNRSFNKKSNNAQGGQSKLNPPGHLTESNSASTARIINNGTHVQPQLHGASDGPVTKSSESAAAHRSAGILPKAPTSLRPPLISDPILPTSSAKGDASKAFPFQFGSIAPGFVNGMAIPARTSSAPPNLDEQKRDQALHDSYKSVPSVPVPPVPKQQQSPRKDAGVTEQSNAGESHIGGTKAKKDSQVSPLTPTSQMPKPSVPVTGISMSTPYHQSQAPLQFGGANPQIQSQGMSTASLPMPIPMPLPIGNATQVQQPVFVPGLQPHPMHPQGIMHQGQNMTFAPQMGHQLPHQLGSMGIGIGPQYPQQQGGKFAGPRKATTVKITHPETHEELRLDKRTDAYSDGGSSGARSHPNIPSQPQPVKSFPSSHPVNYYSSSSNNTNSLYYPPNSLPLTGSLISVNSQPPMFNYPVNHGPQGANFMNSSMLGSLPINKASTPTGAASLSIKPGGTSAIVDENGESPSSTVSCDGSCSSEISLQQSKLSSDSVPVVSINEGGRESLSRSNSMKDKKPGKKGQLSQHQVSVQSPTADNVPSRAVDHGISDAGVSKPVGTKTNHSAAITSEDLPTSDTIPSSISTAVEVKTNGSAEVSACVSAEGSGAQTGDRVHNHNPGKIDKLAEGNFGTSDLKSVDLPETNLKVGSENTGGESGTKDRPIIEPNKAKTTTKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEAVLSSESLESATTSPSLKQLPKDAAKSDALASEKCGHSKAEIDDWEDAADMSTSKLEVHDKSQEVGDGSVNTAKKYSRDFLLKFVEQCMDLPEGFEVTPDIESLMSANFGNSHVFERDSHPSPGRIVDRPGGMSRMDRRGEMVMEDDRWNKVSGAYRSGRGMDGIGGNVGVRSGQGGNFGVLRNPRAQTPPQYAGGILSGPMQSVGNHGGRNNPDGERWQRSASFQQRGLIPSPTQTPLQIMHKADNKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSAEEREQRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDLEALCKLMSTIGEMIDHPKAKEHMDAYFERMRLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRPGRGLGNNQSARRNPMDFGPRGSSMLSTPNSQMGGPRGLPTQVRGYGASQDARFEERQSYEARTLSVTLPQRSLGDDSITLVPQGGLARGMSTRGSTAISNLPISDVLPVPGDSHRMSTGLNGHSNLSECTPHSSREDHVSRYSGPSAYDQSSLAERNVNHGNQDSRSSHRNLEPHAQLQGSTVSQNASPEKIWPEERLRDMSLSAIREYYSARDVNELALCVKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLVNLVTSQHGTLSQVHLIKGFESVLSTLEDAVNDAPRAAEFLGQIFAKALTESVVTLKEIGQLIHDGGEEPGSLLEVGLSADVLGSTLEMIQSEKGDAFLKEIRSSSNLELETFRPPNAKTSRKLEKFI 1650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1712 1650 MobiDBLite consensus disorder prediction 209 225 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 191 250 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 1373 1417 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 649 792 - -
Aed2g1712 1650 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 114 453 IPR045208 GO:0003743
Aed2g1712 1650 MobiDBLite consensus disorder prediction 777 792 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 374 425 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 1237 1258 - -
Aed2g1712 1650 SMART if4_15 1012 1234 IPR003890 GO:0003723|GO:0005515
Aed2g1712 1650 Pfam MIF4G domain 1012 1234 IPR003890 GO:0003723|GO:0005515
Aed2g1712 1650 ProSiteProfiles MI domain profile. 1462 1586 IPR003891 -
Aed2g1712 1650 Pfam MA3 domain 1468 1575 IPR003891 -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 374 391 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 502 623 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 755 770 - -
Aed2g1712 1650 Gene3D - 1457 1650 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 506 551 - -
Aed2g1712 1650 Gene3D - 1012 1247 - -
Aed2g1712 1650 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 699 1640 - -
Aed2g1712 1650 Coils Coil 1094 1126 - -
Aed2g1712 1650 SUPERFAMILY ARM repeat 1008 1236 IPR016024 -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 567 583 - -
Aed2g1712 1650 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 699 1640 IPR045208 GO:0003743
Aed2g1712 1650 MobiDBLite consensus disorder prediction 552 566 - -
Aed2g1712 1650 SUPERFAMILY ARM repeat 1458 1648 IPR016024 -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 1 144 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 234 250 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 679 699 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 1285 1301 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 395 425 - -
Aed2g1712 1650 SMART ma3_7 1463 1577 IPR003891 -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 43 112 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 599 623 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 1104 1128 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 1237 1301 - -
Aed2g1712 1650 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 114 453 - -
Aed2g1712 1650 MobiDBLite consensus disorder prediction 865 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1712 Aed-Chr2 21742367 21751038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1712 1 1649 Eukaryotic Initiation Factors Gene Family AT3G60240 46.381 0.0 1290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1712 K03260 - gmx:100798562 2711.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1712 2 21742367 21751038 Aed2g1712 2 21742367 21751038 ECH
Aed2g1712 2 21742367 21751038 Aed9g1624 9 19559785 19568547 PCT