Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1711 ATGCAGCTCACTCACCTGTGCCTTATCATGCTTCCCTCAGATTATGATAAACTAGAGCCACTTCAACATGCAACCCCACAAACACAAACAATTCACAAAGGGTCGCAGAAAAAAGTTGAAAAGTCAAAAAAACAACCTCATGGAGCATGTGGAGGCCATTTTGTTGCTACCCTTCATGGTTCTTTGACAAAGTTGTTGTGTAACACAAAGTGGTGGAACTGTACTAATTGGAACCTATGCCAACAACATGGTGCAAGAAGAAGAAGAAGAAAAACAATCACAACCAATGAAATCAAGAGTAGTAATTCTTGTGTGTTTCATGACATGGAGGGTGTGCAATTCTCTTCAAGCAACAACATGAGTCCAAGGATTTTCAGCTATGCTGAGCTCTACATAGGGTCAAGGGGGTTCTCTGAGGAGGAGGTTCTAGGAAGTGGAGGTTTTGGCAAAGTGTACAAAGCTGTCATGCCAAGCGATGGAACAGTGGTGGCTGTGAAGTGTTGCTTGGGAGGGAAGAAAGGTGGTGGCGAGTTTGACAAGACTTTTGCTGCTGAGCTAGCAGCAGTGGCACACCTTCGCCACAAGAACCTTGTCCCCTTGAGGGGATGGTGTGTTTTCGAGGATCAGCTTCACCTTGTGTATGAATACATGCCTAATTCGAGCCTCGACCGGGTTCTGTTTCGCAAGAGCTCGAAGAAGGAAGAGGAGGAGACACTCGGGTGGACGAGGCGTGGGAGAATTGTGAAGGGCTTAGCTTGTGCATTGAACTATCTTCATGAGCAGTTGGAGACTCAGATCATTCATAGGGATGTGAAGAGCAGCAATGTGATGCTTGATTCCAACTACAATGCTAGGTTGGGGGATTTTGGCTTGGCGAGGTGGCTTGAGCATGAGCTTGAGTATGAGTATGAGTATGAGACAAGGAAAAGGAAAGTATCAACATCAACAACATCAAGAAGCATGTTTGAGCATTTTAAGTTGAGTGAGACAACAAGGATTGGTGGCACAATTGGTTACTTGCCCCCAGAGAGCTTCCAGAGAAGGAGCAATGTTTCCACCGCGAAATCCGATGTGTTCAGCTTTGGGATAGTTGTGTTGGAGGTGGTGTCTGGAAGAAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTACTTGATTGGGTTAGAAGGCTTAGTGATGAAAAAAAGCTTGTTTCTGCTAGGGACACAAGGCTAGTAATAGATGATGGTGGTGGTTCCTACAAGGCTTCTGAGATGGAGCATTTGATTCACATAAGCCTCTTGTGCACACTCCATGACCCTCAATTGAGGCCAAGCATGAAGTGGATTGTGGAGGCACTTTCTGACATGTCAAACAATTTGCCAACACTGCCTTCATTCCACTCACATCCTATGTACATCTCTTTCTCATCCTCTTCTGAGACTAGTCCAAGCACCACGACGAAAGGCACCGTCTCAAACTCAAACTCAAAGTCAAGTTCAGGAACAGAAAGCTCTAGCAACCATAACCATACTAGTTCCAATTCCAAATTTGTCACAGCCACAGGAGAGACTATATATGTAACTGCTGAAGCTGAACACAAAAACAGTAGTGGAACTAGCTCTTTTTCCAAGAGTTGCAAGAGAGTGATGCATCATCAGAAGACATCGTTTGTTGAAACACCTAGGGAGATACCATACAAGGAGATTGTTTCGGCCACGGATAACTTCTCAGAGTCCAAAAGGGTGGCTGAGCTAGACTTTGGAACTGCATACCATGGCATCCTTGATGGCCACTGTCACCATGTCATGGTGAAACGCCTCGGCTTGAAGACATGCCCCGCATTGCGCCAGAGATTCTCCAATGAGCTGAGGAACCTGGCAAGGCTTCGCCACAGGAATTTGGTGCAGCTTAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCAGCTAGAAGATTTCTCAGTCACCAACTTCACCATCATAGCAATGGTACTAAAAATTCTAATTTTGTCCTCAAATGGCATCATAGGTATAACATAGTGAAATCACTTGCATCTGCACTTCTCTATCTGCATGAGGAGTGGGATGAACAAGTCATTCACAGGAACATAACCTCTTCAGCAGTGACTCTTGAGCCTGACATGACACCAAGACTAGGTAGTTTTGCTCTGGCTGAGTTTTTGACAAGGAATGAGCATGGCCATCATGTGATCAGCACCAGGAGCAAGTCAAAAAGACCACTTGAGGCATTAGCAGATAGAGGACTAAATGGAGAGTACAATTACAAGGAACTAATGAGATTGGTGGGCTTAGGAGTTGCATGCACCCGTTCTGACCCGAAATTAAGACCAAGTACTAGACAGATTCTAAGCATTCTTGATGGCAATGACAAATTAATCGCGGGGGGAGAATATGGAGAGCAGGGAAGATTGGAGAGAAAGAAATGCTTGCTCTTTGTCACTTGTTAA 2472 0.4511 MQLTHLCLIMLPSDYDKLEPLQHATPQTQTIHKGSQKKVEKSKKQPHGACGGHFVATLHGSLTKLLCNTKWWNCTNWNLCQQHGARRRRRKTITTNEIKSSNSCVFHDMEGVQFSSSNNMSPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYKAVMPSDGTVVAVKCCLGGKKGGGEFDKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLHLVYEYMPNSSLDRVLFRKSSKKEEEETLGWTRRGRIVKGLACALNYLHEQLETQIIHRDVKSSNVMLDSNYNARLGDFGLARWLEHELEYEYEYETRKRKVSTSTTSRSMFEHFKLSETTRIGGTIGYLPPESFQRRSNVSTAKSDVFSFGIVVLEVVSGRRAIDLTYPDEKIILLDWVRRLSDEKKLVSARDTRLVIDDGGGSYKASEMEHLIHISLLCTLHDPQLRPSMKWIVEALSDMSNNLPTLPSFHSHPMYISFSSSSETSPSTTTKGTVSNSNSKSSSGTESSSNHNHTSSNSKFVTATGETIYVTAEAEHKNSSGTSSFSKSCKRVMHHQKTSFVETPREIPYKEIVSATDNFSESKRVAELDFGTAYHGILDGHCHHVMVKRLGLKTCPALRQRFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSARRFLSHQLHHHSNGTKNSNFVLKWHHRYNIVKSLASALLYLHEEWDEQVIHRNITSSAVTLEPDMTPRLGSFALAEFLTRNEHGHHVISTRSKSKRPLEALADRGLNGEYNYKELMRLVGLGVACTRSDPKLRPSTRQILSILDGNDKLIAGGEYGEQGRLERKKCLLFVTC 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1711 823 SUPERFAMILY Protein kinase-like (PK-like) 552 795 IPR011009 -
Aed2g1711 823 Pfam Protein kinase domain 138 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1711 823 Pfam Protein tyrosine and serine/threonine kinase 576 735 IPR001245 GO:0004672|GO:0006468
Aed2g1711 823 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
Aed2g1711 823 MobiDBLite consensus disorder prediction 26 45 - -
Aed2g1711 823 PANTHER - 745 803 - -
Aed2g1711 823 MobiDBLite consensus disorder prediction 473 511 - -
Aed2g1711 823 Gene3D Transferase(Phosphotransferase) domain 1 655 747 - -
Aed2g1711 823 PANTHER - 238 372 - -
Aed2g1711 823 PANTHER - 314 741 - -
Aed2g1711 823 PANTHER - 76 238 - -
Aed2g1711 823 SUPERFAMILY Protein kinase-like (PK-like) 112 449 IPR011009 -
Aed2g1711 823 ProSiteProfiles Protein kinase domain profile. 137 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1711 823 Gene3D Phosphorylase Kinase; domain 1 97 216 - -
Aed2g1711 823 Gene3D Phosphorylase Kinase; domain 1 531 649 - -
Aed2g1711 823 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Aed2g1711 823 ProSiteProfiles Protein kinase domain profile. 572 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1711 823 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 238 372 - -
Aed2g1711 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Aed2g1711 823 SMART serkin_6 137 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1711 823 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 745 803 - -
Aed2g1711 823 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 314 741 - -
Aed2g1711 823 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 76 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1711 Aed-Chr2 21736873 21739523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1711 540 797 Receptor kinase-like Gene Family AT5G59270 30.671 1.82e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed2g1711 Pkinase 8.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1711 - - gmx:100781955 1098.19