Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed2g1706 | ATGAAGTGCTTTTACTATTTCAAAGACAAATCCAAGAGATGCAAACAAAGGTCGGCACCCGAACTGAAAGAGCAAGAGAAACTGGAGTTTTCCGGGCCAGGTAGGGTCACCAAGTCTTCCTGCTCATCGGCATCGCCTCGCGGGATACCAGAGCTCTACGAGGAGAAGGGTCACAATTTGAGGGCCTTCTCCTTCACCGAGCTCAAGCGCGCGACAAGCGATTTCAGCAGGCTTCTCAAGATAGGAGAAGGTGGATTTGGAAGTGTGTTTAAAGGCTCAATCAAGCCTGCTGATGGGAATGGGAATTCTGTTTTCGTTGCCATCAAAAGGCTTAACAAGGATGCATTACAGGTTATCTATCGAGATTTTAAAGCTTCAAATGTATTACTGGATGAAGACTTCAAGCCAAAGCTTTCCGATTTCGGACTTGCTAGGGAGGGACCAGTAGCTGGTGATACTCATGTTTCAACAGCTGTGGTGGAGAGGCTGAAGCAGATAATCCAAGACTCTAATGAAGAGCAGCAGCACCATGCAGATAATAATAAAAGCATTGATTCTGTTGAGGTATCTGAGAATGATCCAGTTGAAGAAGCTGAAGAGAAGGCAAGTGAATCAGGCTCTACAGAGTTATGGAGAAAGAGGATGGAACATCTTGCAAAACTTGGTGAACATGTGGAGAGTGCTAGCAGAAGAAGATTTATGATCCTTCAGAGAGCCAATGTGTCTACATAG | 732 | 0.4522 | MKCFYYFKDKSKRCKQRSAPELKEQEKLEFSGPGRVTKSSCSSASPRGIPELYEEKGHNLRAFSFTELKRATSDFSRLLKIGEGGFGSVFKGSIKPADGNGNSVFVAIKRLNKDALQVIYRDFKASNVLLDEDFKPKLSDFGLAREGPVAGDTHVSTAVVERLKQIIQDSNEEQQHHADNNKSIDSVEVSENDPVEEAEEKASESGSTELWRKRMEHLAKLGEHVESASRRRFMILQRANVST | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed2g1706 | 243 | ProSiteProfiles | Protein kinase domain profile. | 1 | 243 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed2g1706 | 243 | MobiDBLite | consensus disorder prediction | 18 | 48 | - | - | |
Aed2g1706 | 243 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 109 | IPR017441 | GO:0005524 | |
Aed2g1706 | 243 | PANTHER | OS07G0495150 PROTEIN | 115 | 160 | - | - | |
Aed2g1706 | 243 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 159 | IPR011009 | - | |
Aed2g1706 | 243 | PANTHER | OS01G0588500 PROTEIN-RELATED | 115 | 160 | - | - | |
Aed2g1706 | 243 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 118 | 130 | IPR008271 | GO:0004672|GO:0006468 | |
Aed2g1706 | 243 | MobiDBLite | consensus disorder prediction | 170 | 210 | - | - | |
Aed2g1706 | 243 | PANTHER | OS01G0588500 PROTEIN-RELATED | 29 | 117 | - | - | |
Aed2g1706 | 243 | Gene3D | Transferase(Phosphotransferase) domain 1 | 53 | 116 | - | - | |
Aed2g1706 | 243 | PANTHER | OS07G0495150 PROTEIN | 29 | 117 | - | - | |
Aed2g1706 | 243 | Gene3D | Transferase(Phosphotransferase) domain 1 | 117 | 164 | - | - | |
Aed2g1706 | 243 | MobiDBLite | consensus disorder prediction | 170 | 186 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed2g1706 | Aed-Chr2 | 21689237 | 21693615 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed2g1706 | 63 | 145 | Receptor kinase-like Gene Family | AT4G23280 | 33.333 | 2.28e-12 | 64.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Aed2g1706 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed2g1706 | - | - | gmx:100784625 | 214.157 |