Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1700 ATGCTCCGCCGCGCATCCTCCGCACTCCTCTCCGGCGCCTCCCGCCGCCGCCTCTCCACCGACGTGACGGCGACTCCCGCCGCGGTGAACTCCGGCTTCAACGAGGCGTGGAAGAAAGTGAGTCCCAACATCGATCCACCGCAGACGCCGCTCGCGTACATCAAGCCCCGACCTCCCATTCCTTCAACTCTCCCTACAAAACTCACCGTCAACTTCGTCTTACCCTACGCTTCTCAATTGGCCGCAAAAGAGGTTGATATGGTCATTGTACCAGCAACCACTGGGCAGATGGGTGTTCTCCCCGGACATGTAGCAACAATTGCAGAGTTGAAACCCGGTGTCCTATCTGTACACGAAGGGAACGACACAACCAAGTATTTTGTCAGCAGTGGCTTTGTATTCATCCATGCAAACTCCGTTGCTGACATAGTAGCTGTGGAGGCTGTGCCAGTAGACCAAATTGACGCCAATCTAGTCCAGAAGGGTCTTCAAGATTTCACCCAGAAGCTGAACTCGGCCTCAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGGGTTGATGTCCATAGCGCTCTCAACTCTGCCCTTACAGGCTAA 597 0.5444 MLRRASSALLSGASRRRLSTDVTATPAAVNSGFNEAWKKVSPNIDPPQTPLAYIKPRPPIPSTLPTKLTVNFVLPYASQLAAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDTTKYFVSSGFVFIHANSVADIVAVEAVPVDQIDANLVQKGLQDFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1700 198 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 198 IPR001469 GO:0015986|GO:0045261|GO:0046933
Aed2g1700 198 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 198 - -
Aed2g1700 198 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 79 183 IPR001469 GO:0015986|GO:0045261|GO:0046933
Aed2g1700 198 Gene3D - 155 197 - -
Aed2g1700 198 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 68 149 IPR036771 -
Aed2g1700 198 CDD F1-ATPase_delta 68 191 IPR001469 GO:0015986|GO:0045261|GO:0046933
Aed2g1700 198 Gene3D - 59 154 IPR036771 -
Aed2g1700 198 Coils Coil 163 183 - -
Aed2g1700 198 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 68 140 IPR020546 GO:0015986
Aed2g1700 198 Hamap ATP synthase epsilon chain [atpC]. 66 186 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1700 Aed-Chr2 21633892 21637270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1700 1 198 Primary Pumps ATPases AT5G47030 66.995 4.58e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1700 K02134 - gmx:100780778 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1700 2 21633892 21637270 Aed2g1700 2 21633892 21637270 ECH