Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1641 ATGGCGAGTTTTGGGAGCATGTTCTGTGGGGAATCTGGTTTTTGCAGTGATTTTAGGCTTCTCATTCATCCTTCCGCTTGTGTGAACCATTTGTTGATCTCTTGCTTTGATGTGTTGCTGCTTATCATGCTTGTATTCATTATGATCCAGAAGTCAACATTAAAACCATCTCGGGGTCTGATACAGGTGCAAAGATATTCATATTTTCAGCTAGTTTCAGCCATAGCCAATGGTGTTCTTGGGTTGGCCATTTTGTGCTTTGGCATTTGGGTTTTAGAGGAAAGATTGAGGAAATCCCAAACTGCGTTGCCTCTTAATTGGTGGTTGCTAGAAATCTTTCATGGACTAACATGGTTGTTAGTGACTTCAACAATAAGTCTTAAGTTGAAAAAACCTTCCAAGAGCATGGACAAGGCTTTTTTCTGTCCTAATCTTCTTGGAATCCCTTATGCCACCTTAAAGGGCGAGTCCAACAAAAATGGTTCTATTAGTTATGTAACCCCATTTGCCAAAACTGGATTCTTTGGCAAAATGTCATTTTGGTGGATGAATCCATTGATGAAAATTGGCAAAGAGAAAACACTTCAGGATGAAGACATTCCAAGGTTACGGGAGGAGGATCGAGCAGAAAGTTATCTTTTGTTTCTGGATCAGTTGAACAGACAAAAACACAAGGATCAATCCTCGCAGCCATCAGTTTTGAGGACAATAATTTTATGCCATTGGAAAGAAATTTTAATATCAGGATTCTTTGCAATGCTTAAGGTACATGCTCTGTCTTCGGGACCTCTTCTTTTGAATTCTTTTTTATTGAGGCAATGGTACTTCCGCTGCAGACTTATTGGCCTGAAAGTTAGGTCGTTGCTAACTGCAGCCATCTATAAAAAACAATTGAGAATTGGTGAATTTCCCTATTGGTTTCACCAGACTTGGACAACAAGCTTTCAGCTATGTATCTCATTAGTTATAGTTTTCCATGCTGTTGGATGGGCAACAATGGCCTCCTCGGTGGTGATAGTAATCACTGTTCTTTGCAATACTCCACTTGCGAAGTTACAGCACAAGTTTCAAAGCAAACTTATGGTGACACAAGATGAGAGATTGAAGGCTTGTTCTGAGGCTCTGGTGAATATGAAGGTGTTGAAGTTGTATGCATGGGAAGCCAGTTTTAGAGGTGCTATAGAGAGATTAAGAAATGAGAAGCTCAAATGGTTGTCTGCAGTGCAATTAACAAAGGCGTACAACACCTTTTTCTTTTGGTCCTCACTTGTTTTGGTCTCTGCTGCTTCCTTTGGGGCATGTTACTTTCTTAACGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCAACTTTGCGCCTTGTTCAAGATCCAATTAGAACCATCCCTGATGTTATCGGGGTGGTCATTCAGGCAAAAGTTGCATTTACTCGGATTCTAAAATTCCTGGAGGCACCTGAACTGCAGAGTGCAAATACCACACAAAGGTGTCTCAATGAGAACAAGAGGGGTTCAATTTTAATCAAGTCTGCTGACTTTTCATGGGAAGATAATGTATCAAAGCCAACACTGAGAAACATAAATTTGGAGGTTAGACCAGGGCAAAAGGTGGCTATCTGTGGAGAGGTTGGCTCAGGCAAATCAACTCTCTTAGCAGCAATTCTCAGAGAAGTTCCTAATACTGAGGGGACATTTATGGGAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGTCAGGTACAATTAAGGGAGAATATATTGTTTGGAGCAGCTATGGATGCTGAAAAATATCAAGTAACACTTCATAGGTCTTCACTATTGAAGGACCTTGAGTTGTTTCCCCATGGTGATCTCACTGAAATAGGGGAGAGAGGCATCAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCACGTGCACTGCATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACACACTGCAACAAATTTATTTAATGAATACATAATGGAAGGACTTGCTGGGAAAACAGTCTTGCTCGTGACTCATCAAGTTGACTTCCTTCCTGCATTTGATTCTGTTTTGTTGATGTCAAATGGGGAAATCATAGAAGCTGCTCCTTATCATCATTTGTTGAGCTCAAGCCAAGAATTTCAGGACCTTGTGAATGCTCACAAGGAGACTGCTGGTTCTGACCGGCTTCTGGATGTTACTTCTCCGCAGAAACATTCAAATAGTCCTAGAGAAATTAGAAAAACATCTACCGAGCAGCAATATGAAGCATCAAAAGGCGACCAATTGATTAAGCAAGAAGAAAGAGAAAAAGGAGACCAAGGGTTCAAACCGTATATACAGTATCTGAATCAGAACAAAGGATATATATACTTCTCTGTGGCTTCTCTTTCTCACTTAGCATTTGTGGTTGGCCAAATATTACAAAACTCATGGATGGCCGCTAGTGTTGACAATCCTCAAGTCAGCACTTTGCAAATGATTCTTGTTTACTTGTTGATTGGAGTTATTACAACATTATTCTTGTTGATTAGAAGTCTTTTTGTGGTTGCTTTGGGCCTTCAATCATCAAAGTCTTTATTTTCACAGCTACTGAACTCCCTTTTTCGTGCCCCCATGTCATTTTATGATTCCACTCCTTTAGGACGGATACTTAGCAGGGTCTCCTCAGATCTCAGCATTGTGGACCTTGATGTCCCATTCACCTTTGTTTTTGCTGTGGGAGCTACTATGAATTGCTACGCTAATCTAACTGTTTTAGCTGTTGTTACATGGCAAGTCTTGTTTGTCTCCATACTAATGATTTATTTTGCAATCCACCTGCAGAAATATTACTTTGCCTCTGCAAAAGAACTGATGCGGATGAATGGCACAACAAAATCCTTTGTTGCTAACCATCTTGCTGAATCTGTTTCTGGAGCTATGACAATAAGGGCGTTTGAGGAGGAAGATCGTTTCTTTGAGAAAAATCTTGATCTAATTGATATCAATGCGAGTCCTTACTTCCATAAATCAGTGAGTGCTGTTGTTCTTGCATCTGCGGCACTGTGCATGGTTGTACTTCTACCTGGAACTTTCTCCTCTGGATTTATTGGCATGGCTCTCTCTTATGGGCTTTCACTTAACATGTCCTTGGTATTTTCAATTCAAAATCAATGCAACATAGCAAATTTTATAATATCAGTGGAGAGGCTAAATCAGTATATGCATATACCAAGTGAGACTCCAGAAGTAATAGAAGAAAACTGTCCACCTGTGAATTGGCCAGTTGCTGGTAGAGTACAAATAAATGAATTGCAGATACGTTACAAGCCTGATGCACCAGTAGTACTCCGTGGAATCACATGCACATTTGAAGGAGGGCACAAAATTGTCAGATACAATATGGAGCCCTTAACTCAAAACTCTGATCAAGAGATATGGGAAGTACTAATACATCTTCCATATGAAGGTTCTTGGGAAGTGCCAGTTGCAAGAGGTTGTCTAAGAGAAAGAAGAGGGATTAGACTCTTCAGGTACAAACACTTCATGTTTCGCTGTCACAACTTTGCAGTGAGCAATTTTTGTTTAATTGTTGAAGCTGGAGCAAACTGGAGCATGGGACAAAGGCAGCTATTCTGTTTGGGGCGTGCTCTTCTCAGGCGAAGTAGGATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTTTGCAGAAAACAATTAGGACCGAGTTTGCAGATTGTACAGTGATCACAGTAGCTCACAGGATACCAACTGTGAAGGATTGCACCAAGGTTCTTGCCATAAGTGATGGGAAACTGGTGGAGTATGATGAGCCAATGAACTTGATAAAGAGAGAAGGATCACTGTTTGGGAAGCTTGTTAAGGAATACTGA 3918 0.4053 MASFGSMFCGESGFCSDFRLLIHPSACVNHLLISCFDVLLLIMLVFIMIQKSTLKPSRGLIQVQRYSYFQLVSAIANGVLGLAILCFGIWVLEERLRKSQTALPLNWWLLEIFHGLTWLLVTSTISLKLKKPSKSMDKAFFCPNLLGIPYATLKGESNKNGSISYVTPFAKTGFFGKMSFWWMNPLMKIGKEKTLQDEDIPRLREEDRAESYLLFLDQLNRQKHKDQSSQPSVLRTIILCHWKEILISGFFAMLKVHALSSGPLLLNSFLLRQWYFRCRLIGLKVRSLLTAAIYKKQLRIGEFPYWFHQTWTTSFQLCISLVIVFHAVGWATMASSVVIVITVLCNTPLAKLQHKFQSKLMVTQDERLKACSEALVNMKVLKLYAWEASFRGAIERLRNEKLKWLSAVQLTKAYNTFFFWSSLVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFTRILKFLEAPELQSANTTQRCLNENKRGSILIKSADFSWEDNVSKPTLRNINLEVRPGQKVAICGEVGSGKSTLLAAILREVPNTEGTFMGSLPMFLKQHGYSQVQLRENILFGAAMDAEKYQVTLHRSSLLKDLELFPHGDLTEIGERGINLSGGQKQRIQLARALHQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSNGEIIEAAPYHHLLSSSQEFQDLVNAHKETAGSDRLLDVTSPQKHSNSPREIRKTSTEQQYEASKGDQLIKQEEREKGDQGFKPYIQYLNQNKGYIYFSVASLSHLAFVVGQILQNSWMAASVDNPQVSTLQMILVYLLIGVITTLFLLIRSLFVVALGLQSSKSLFSQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFTFVFAVGATMNCYANLTVLAVVTWQVLFVSILMIYFAIHLQKYYFASAKELMRMNGTTKSFVANHLAESVSGAMTIRAFEEEDRFFEKNLDLIDINASPYFHKSVSAVVLASAALCMVVLLPGTFSSGFIGMALSYGLSLNMSLVFSIQNQCNIANFIISVERLNQYMHIPSETPEVIEENCPPVNWPVAGRVQINELQIRYKPDAPVVLRGITCTFEGGHKIVRYNMEPLTQNSDQEIWEVLIHLPYEGSWEVPVARGCLRERRGIRLFRYKHFMFRCHNFAVSNFCLIVEAGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVKDCTKVLAISDGKLVEYDEPMNLIKREGSLFGKLVKEY 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1641 1305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 999 1303 IPR003439 GO:0005524
Aed2g1641 1305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1198 1305 - -
Aed2g1641 1305 Gene3D ABC transporter type 1, transmembrane domain 213 495 IPR036640 GO:0005524|GO:0016021
Aed2g1641 1305 Pfam ABC transporter 525 657 IPR003439 GO:0005524
Aed2g1641 1305 SUPERFAMILY ABC transporter transmembrane region 265 488 IPR036640 GO:0005524|GO:0016021
Aed2g1641 1305 SMART AAA_5 534 705 IPR003593 -
Aed2g1641 1305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 298 1132 - -
Aed2g1641 1305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 67 140 - -
Aed2g1641 1305 ProSitePatterns ABC transporters family signature. 630 644 IPR017871 GO:0005524
Aed2g1641 1305 Gene3D ABC transporter type 1, transmembrane domain 762 1083 IPR036640 GO:0005524|GO:0016021
Aed2g1641 1305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 509 728 IPR003439 GO:0005524
Aed2g1641 1305 Pfam ABC transporter 1099 1234 IPR003439 GO:0005524
Aed2g1641 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 728 IPR027417 -
Aed2g1641 1305 SUPERFAMILY ABC transporter transmembrane region 800 1082 IPR036640 GO:0005524|GO:0016021
Aed2g1641 1305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 272 300 - -
Aed2g1641 1305 CDD ABC_6TM_ABCC_D1 265 480 IPR044746 GO:0140359
Aed2g1641 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1094 1296 IPR027417 -
Aed2g1641 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 808 1030 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g1641 1305 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1198 1305 - -
Aed2g1641 1305 Pfam ABC transporter transmembrane region 307 457 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g1641 1305 Pfam ABC transporter transmembrane region 799 1028 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g1641 1305 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 150 271 - -
Aed2g1641 1305 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 272 300 - -
Aed2g1641 1305 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 298 1132 - -
Aed2g1641 1305 Gene3D - 1132 1303 IPR027417 -
Aed2g1641 1305 MobiDBLite consensus disorder prediction 736 778 - -
Aed2g1641 1305 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 67 140 - -
Aed2g1641 1305 CDD ABC_6TM_ABCC_D2 796 1077 IPR044726 GO:0140359
Aed2g1641 1305 CDD ABCC_MRP_domain1 507 705 - -
Aed2g1641 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 303 472 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g1641 1305 Gene3D - 502 734 IPR027417 -
Aed2g1641 1305 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 150 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1641 Aed-Chr2 20773181 20779528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1641 505 750 Calmodulin-binding Proteins AT2G36910 31.111 3.26e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1641 K05666 - gmx:100817665 2053.1