Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1634 ATGGAGTACGAGAGGAAAACCATCACCACCAAGTTTGTGAAATCCTCCAAGTTCTTCCCCTCCAGAGTCATTCGCATTTCAGCGACGGATCACGACGCCACAGACTCGTCCAGCGACGAAGAAGAAGGAGAAAGACGTATCAAAGTGAAGAGAGTGGTTAACGAGATAAGAGTCGTGTGTGTCAACAACAAAAAAAGAAACAACATTTTCGACCACAACAACAATAGTAATTTCTGCGTTGCAACCAGAAATAATGAAAGTCTCAAACAAAAACAACAACAACAAAAACAGAGTCTTGTTGTTCCATCAGGCGAGCTCGGCTACATGGATCACACGACGATAAATATCAAACAGCACAAGTTCCGCGGCGTGCGCCAACGGCCGTGGGGCCGGTGGGCGGCTGAGATAAGAGACCCGGTGCGACGGACCCGAGTGTGGCTCGGGACCTTCGACAGCGCCGAGGAGGCCGCCGCGGTTTACGACAAAGCTGCCATTCGGTTCCGAGGCGCCGATGCGGTCACCAATTTCATCAAACCTCCATCGAGAGAGTCTCTTGAATGCGAAGACGACGGTGGCGGCGGCGAAAACAACGTTGTTGTCGTGAACGGAACGAGTTGTGCTTCACCCACCTCTGTTCTCGTGTTTCAGCCATGGATGGAACCGTTCAAAGCGGAAGAAGAAGTGTTCCATGGGTTAAGCGATGGTTACGATGATTATGGTTTCATGTTTTCCAATAACTATGCACTTGGTGATCAACCTCTTCTTCCTACTACTACTACGACGTCGTATTGCAACGTTGATAATGATGTTTCGTTGGACGAGGAAGATCTTGAGTTGTGTAAATGGGACGTGGATAATTATTTCAGTGATGATTATGATCCTTCGTTGCAACAATGA 897 0.4827 MEYERKTITTKFVKSSKFFPSRVIRISATDHDATDSSSDEEEGERRIKVKRVVNEIRVVCVNNKKRNNIFDHNNNSNFCVATRNNESLKQKQQQQKQSLVVPSGELGYMDHTTINIKQHKFRGVRQRPWGRWAAEIRDPVRRTRVWLGTFDSAEEAAAVYDKAAIRFRGADAVTNFIKPPSRESLECEDDGGGGENNVVVVNGTSCASPTSVLVFQPWMEPFKAEEEVFHGLSDGYDDYGFMFSNNYALGDQPLLPTTTTTSYCNVDNDVSLDEEDLELCKWDVDNYFSDDYDPSLQQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1634 298 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Aed2g1634 298 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 19 292 - -
Aed2g1634 298 CDD AP2 120 176 IPR001471 GO:0003700|GO:0006355
Aed2g1634 298 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Aed2g1634 298 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Aed2g1634 298 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Aed2g1634 298 Pfam AP2 domain 120 169 IPR001471 GO:0003700|GO:0006355
Aed2g1634 298 PANTHER - 19 292 - -
Aed2g1634 298 SUPERFAMILY DNA-binding domain 120 176 IPR016177 GO:0003677
Aed2g1634 298 Gene3D AP2/ERF domain 119 178 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1634 Aed-Chr2 20640984 20641880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1634 4 219 AP2-EREBP Transcription Factor Family AT4G27950 39.912 5.24e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g1634 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1634 - - gmx:100815537 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1634 2 20640984 20641880 Aed9g1496 9 17846813 17848407 PCT