Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1614 ATGTGCAATTCTTCAAAAAAGAACAAGCCTCCCTTCATTGTGAATGTTCTGGTTGTTGATGGAGATGCTGTTGCAATGAACACAACAATGAAAAAACTTACAACCTTGAAATACAAAGCTGTAGGTACCACACATCCCTCACTTGCTTTGGAACAACTTCGTCAAAATGAAGGACAATTTCATATCATTGTTATGGAAGTTCATATGCCGGATCTTGATGGATTCAAACTAAAACAAGTCGTTGATGAAGAATTTGCAATACCAGTCATTATGATTTCAGATGACAAAAGTGAAGAAATCCAGAAAAAAGCTCTAATGTCTGGTGCAATGCGTTATATATTTAAGCCAGCAAAAACCGAAGACTTTGTAGATGCAGTTCCAACAAAAGTTCTTCTAATCATGAATGTTGAAGGGTTAACTAGGAGAAATGTGGCAAGTCATTTGCAGAAATATAAGCTTTACTTATACCGAGTTCAAAAAATATGTGTTGAATTAGTAAAGCAAGCAAATGAAGACAATGATGTCATTTTGTGTAGAAAGGCAACAACACACCCTTCACTAGTGTTTAGCCTCGTTAAAAATGATTTAGAAAAAGCTATGAAGAGAACTAGGAAGAAAAGTTTAGCATATTATGAATCAAATGAGGTATATTTATCTAATTTAAGATTCAAGTTATCAAACTTGTTTAAACATGACAAACATAATCATAGCAAAGTGAACCCTAATGCTAATGATGCATTAACTCCTCCAAATTTAGTTCAACACAATGAGCCTTCACCAAATAATAAACCCCCAATTAACCCTTTTGGAACACTTGAATTCAACAACCAAACATCGAGTTCCCCTAGTGTTGCTGAGTACAATGTTAATCTAGGGTTGTTGAAACCAAATTCTTCTAATTTGGTTGGGATTCAAGTAGGTTCTACTATTGGTGAGATATATGACAAAAACCAAACTTTTCCAATTTCAATGGGAGACACTAGTAACAACATTGTTGAAAATGTTGATGTCATTGTGGGAAACTTGTTTCAACCCCAACAACAACATCATCAGATTCATAATCAAGGATATCATCATCAAACTTTTGCAACCATGGACAACAAATTTTCTCCTCAAGGAACATCTGATGGGTCTCATTCCCAAGGAATTGGTGATGCTTTCTCAATGGAAGGTGTTCTTAACAAAGTTCCCATGCAGCATGAAGAAGCAGTCAATTCAGATAGCCTTGTTAATTACTGGGACCAGTGGGACGATTGCTTCCCACTATTTGACCAACTCATCAATGAGGCAAGTTTTGAAGGGGGCTTTGCTAGCATTGAATCCATTTTGAAAGATTTGGAGTGA 1344 0.3579 MCNSSKKNKPPFIVNVLVVDGDAVAMNTTMKKLTTLKYKAVGTTHPSLALEQLRQNEGQFHIIVMEVHMPDLDGFKLKQVVDEEFAIPVIMISDDKSEEIQKKALMSGAMRYIFKPAKTEDFVDAVPTKVLLIMNVEGLTRRNVASHLQKYKLYLYRVQKICVELVKQANEDNDVILCRKATTHPSLVFSLVKNDLEKAMKRTRKKSLAYYESNEVYLSNLRFKLSNLFKHDKHNHSKVNPNANDALTPPNLVQHNEPSPNNKPPINPFGTLEFNNQTSSSPSVAEYNVNLGLLKPNSSNLVGIQVGSTIGEIYDKNQTFPISMGDTSNNIVENVDVIVGNLFQPQQQHHQIHNQGYHHQTFATMDNKFSPQGTSDGSHSQGIGDAFSMEGVLNKVPMQHEEAVNSDSLVNYWDQWDDCFPLFDQLINEASFEGGFASIESILKDLE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1614 447 PANTHER TWO-COMPONENT RESPONSE REGULATOR 125 378 IPR045279 GO:0009736
Aed2g1614 447 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 122 IPR045279 GO:0009736
Aed2g1614 447 SUPERFAMILY CheY-like 15 128 IPR011006 -
Aed2g1614 447 Gene3D - 13 93 - -
Aed2g1614 447 PANTHER RESPONSE REGULATOR 23-RELATED 125 378 - -
Aed2g1614 447 PANTHER RESPONSE REGULATOR 23-RELATED 8 122 - -
Aed2g1614 447 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 125 153 IPR006447 GO:0003677
Aed2g1614 447 Gene3D - 97 156 - -
Aed2g1614 447 ProSiteProfiles Response regulatory domain profile. 15 130 IPR001789 GO:0000160
Aed2g1614 447 SMART REC_2 14 126 IPR001789 GO:0000160
Aed2g1614 447 Pfam Response regulator receiver domain 16 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1614 Aed-Chr2 20296587 20302993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1614 8 120 Response Regulator Gene Family AT4G16110 40.000 1.50e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed2g1614 Response_reg 1.2e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1614 - K14491 aprc:113850659 183.726