Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1604 ATGGTCAAGCCATGCTGCACTATGTGCTTGTGTTTGTGTTTGGTCTTACTTCACATTTTCCTGTGCTTTGTGCCAACACAGTCAGCTCCTGAAAGTGCCATTGTGACACAGATTCCTGGCTTCAGTGGCACTCTACCTTCCAAGCATTATGCAGGGTATGTGACAGTGGATAAGAGTCATGGGAGGAACTTGTACTACTATTTTGTTGAATCAGAGGGTAAACCTTCTGAGGACCCTGTGGTTCTGTGGCTTAATGGGGGACCTGGCTGCTCTAGCTTCGATGGATTCATATATGAGCATGGTCCTTTTAATTTTGAGGCAGCAAAGACAAGGGGGTCTCTTCCCACACTGCACCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTTATATATTTGGATTCTCCTGCTGGTGTGGGATTTTCATACTCAGAAAATAAAACTGATTACATAACTGGGGACATAAAGACTGCCTCTGATTCACATACCTTTCTCCTTAAGTGGTTTGAACTATACCCCGAGTTCCTTTCCAACCCGTTCTTCATTGCCGGAGAGTCATATGCAGGAGGTTACATGGTTGGAAATGGTGTCACAGATGAACAATTTGATGGCAATGCTCTTGTTCCATTTGTACATGGAATGGGACTTATCCCAGATGAACTGTTTGAGGCAGGGAAAGTTACAGAATCCTATATTAGGTTGCCATCTAGCTTTCGGAAGTTGGGTGAGACTGAGAAACCTTTTCCTGTGAGGAAAAGAATGTTTGGTCGTTCTTGGCCCCTCAGAGCTCCTGTGAGAGATGGAATTAAAAGTGTGGTCAGTAGTTGGGATTTATGCACTGGCAGAATTTACTTTGATCATGATGCAGGGAGCATGATCAAGTACCACAAGAATTTAACTTCCAAAGGTTATAGAGCACTTATATTCAGTGGCGATCATGACATGTGTGTTCCATACACGGGGAGTCAAGCATGGATGAGATCAGTTGGATACAAGATTGTTGATGAATGGAGGCCTTGGTCATCCAATGGTCAAGTTGCCGGGTATACACAAGGATACGAGAAAAATCTTACTTTTCTGACTGTAAAGGGATCTGGGCATACTGTTCCGGAATATAAACCACGAGAGGCATTGGACTTTTACAAACGCTTTCTCGCTGGATTGCCAATATGA 1173 0.4382 MVKPCCTMCLCLCLVLLHIFLCFVPTQSAPESAIVTQIPGFSGTLPSKHYAGYVTVDKSHGRNLYYYFVESEGKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTRGSLPTLHLNPYSWSKVSSVIYLDSPAGVGFSYSENKTDYITGDIKTASDSHTFLLKWFELYPEFLSNPFFIAGESYAGGYMVGNGVTDEQFDGNALVPFVHGMGLIPDELFEAGKVTESYIRLPSSFRKLGETEKPFPVRKRMFGRSWPLRAPVRDGIKSVVSSWDLCTGRIYFDHDAGSMIKYHKNLTSKGYRALIFSGDHDMCVPYTGSQAWMRSVGYKIVDEWRPWSSNGQVAGYTQGYEKNLTFLTVKGSGHTVPEYKPREALDFYKRFLAGLPI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1604 390 Pfam Serine carboxypeptidase 262 386 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 Pfam Serine carboxypeptidase 39 191 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 272 387 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 21 189 - -
Aed2g1604 390 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 190 225 - -
Aed2g1604 390 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Aed2g1604 390 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 272 387 - -
Aed2g1604 390 ProSitePatterns Serine carboxypeptidases, histidine active site. 357 374 IPR033124 GO:0004185
Aed2g1604 390 SUPERFAMILY alpha/beta-Hydrolases 35 389 IPR029058 -
Aed2g1604 390 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 PRINTS Carboxypeptidase C serine protease (S10) family signature 357 370 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 189 IPR001563 GO:0004185|GO:0006508
Aed2g1604 390 Gene3D alpha/beta hydrolase 27 237 IPR029058 -
Aed2g1604 390 Gene3D alpha/beta hydrolase 258 388 IPR029058 -
Aed2g1604 390 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 190 225 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1604 Aed-Chr2 20193398 20201625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1604 247 390 Calmodulin-binding Proteins AT2G22960 42.282 8.06e-38 133