Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1598 ATGAAGCAGGGAGTGCTAACACCTGGTCGTGTTCGTCTTTTGCTCCACAGAGGAACTCCTTGCTTCCGTGGTTATGGAAGGCGCAATGGAGAGCGGAGGAGGAAGTCTGTCCGCGGGTGCATTGTTAGCCCAGATCTCTCTGTGCTGAACTTGGTAATTGTGAAGAAGGGTGAAAGTGATTTACCAGGGCTGACTGATGTTGAAAAACCAAGAATGAGGGGTCCAAAGAGAGCATCCAAAATTCGTAAGCTGTTCAACCTTTCCAAGGAAGATGATGTGAGGAAGTATGTCAACACATACCGTCGAACCTTCACAACAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCAAAGATTCAACGATTGGTCACTCCACTGACACTGCAAAGAAAGCGGGCAAGAATTGCTGATAAGAAGAAGAGAATCGCAAAGGCAAAATCTGAGGCCGCTGATTATCAGAAACTTCTTGCCTCCAGATTGAAGGAGCAGAGAGAACGCCGTAGTGAGAGTTTGGCAAAGAGGAGATCCAAGATTTCCAGTACTGCTAAGCCAGCTGCCACTGCGTAG 564 0.477 MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKRRSKISSTAKPAATA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1598 187 SMART Ribosomal_S6e_2 1 66 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aed2g1598 187 MobiDBLite consensus disorder prediction 158 175 - -
Aed2g1598 187 Coils Coil 127 154 - -
Aed2g1598 187 Pfam Ribosomal protein S6e 1 66 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aed2g1598 187 PANTHER 40S RIBOSOMAL PROTEIN S6 1 186 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aed2g1598 187 MobiDBLite consensus disorder prediction 158 187 - -
Aed2g1598 187 Gene3D - 71 172 - -
Aed2g1598 187 PANTHER 40S RIBOSOMAL PROTEIN S6 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1598 Aed-Chr2 20124311 20126746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1598 1 187 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 88.830 1.48e-109 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1598 K02991 - gmx:100786559 317.775