Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1588 ATGGGTGTTCTCCCCGGACATGTAGCAACAATTGCAGAGTTGAAACCGGGTGTCCTATCTGTACACGAAGGGAACGACACGACCAAGTATTTTGTCAGCAGTGGCTTTGTATTCATCCATGCAAACTCCGTTGCTGACATAGTAGCTGTGGAGGCCGTGCCGGTAGACCAAATCGACTCCAATCTAGTCCAGAAGGGTCTTCAAGATTTCACCCAGAAGCTGAACTCGGCCTCAACTAATTTGGAGAAAGCTGAAGCTCAGATTGGGGTTGATGTCCATAGCGCTCTCAACTCTGCCCTTACAGGCTGA 309 0.4951 MGVLPGHVATIAELKPGVLSVHEGNDTTKYFVSSGFVFIHANSVADIVAVEAVPVDQIDSNLVQKGLQDFTQKLNSASTNLEKAEAQIGVDVHSALNSALTG 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1588 102 Coils Coil 67 87 - -
Aed2g1588 102 CDD F1-ATPase_delta 1 95 IPR001469 GO:0015986|GO:0045261|GO:0046933
Aed2g1588 102 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 102 IPR001469 GO:0015986|GO:0045261|GO:0046933
Aed2g1588 102 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 1 53 IPR036771 -
Aed2g1588 102 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 44 IPR020546 GO:0015986
Aed2g1588 102 Gene3D - 59 101 - -
Aed2g1588 102 PANTHER - 1 102 - -
Aed2g1588 102 Gene3D - 1 58 IPR036771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1588 Aed-Chr2 19984290 19984598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1588 1 102 Primary Pumps ATPases AT5G47030 75.490 1.35e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1588 K02134 - gmx:100780778 189.889