Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1577 ATGAACGACGGTGGCGACAGCGCAAAGCCACTCGACTTCGAAAACCTAACAGTCGTCTCCGCCGTGGGGCGTGGCGCCAAGGGCGTGGTGTTCCTCGCGAGGACCGGTGAGCGGTCGTCGTCGAGCGAGTGCGTGGCGCTGAAAGTGATCTCGAAGGCGCTGATCCTGCAGAAGAAGAAAGAGAGATTACTAGTATTAAACGACGACAAGAATGAGTACTCGAGGGTGTCGTTTGAAGAGCGAGTGCTGCGTCGTTTCGATCACCCGCTTCTGCCGAGGCTCAGAGGGGTTTTCGAAACCGATAAAGTCGTTGGCTTCGCCATTGACTACTGCCACGGTGGCACTCTCCATTCTCTTAGGAAGAAACAGACGGAGAAAATGTTCTCCGATGTCACCATCAGGTTTTACGCTGTGGAATTGGTTCTTGCATTGGAGTATTTGCACAATTTGGGAATAGTGTACAGAGATTTGAAGCCAGAAAATGTGATGATTCAAGAAAACGGTCACATAATGTTGGTTGATTTTGACCTCTCCAAAAAGCTAAACCCTAAAACCCCTCACTCACTGAGTCCCAACTCGTCCCCGAGTCCCAAATCGGTGAAACCCGCGAGAAAGCAAAGCCTAACGCGGTTCTACAGCTTCTGCAACTCGGGAATCTCCCCCTGCGACTCGGACTCGGAGCCCCCACTCGGCAGCGTCAACTCAGCGCGCCGCACCGAGTCCGACTCAGTGGAAAAATCAAACTCGTTCGTCGGAACGGAAGAATACGTGGCGCCCGAAATAGTTTCAGCAAAAGGTCACGGCTTTAGCGTTGACTGGTGGTCGTACGGCGTCGTTTTGTACGAGATGCTGTACGGAACGACGCCGTTTAAGGGCGCGAATCGGAAGGAGACGTTTTACCGCATTTTAACGAAGGAGCCGGAGCTAGCGGGGGAGAAGACGGCGTTACGGGATTTGATTGGGAAATTGCTGGAGAAAGATCCTGACCGTCGGATCGAGGTTGATGAAATCAAGGGCCACGATTTCTTCAAGGGGGTTAAGTGGGACACGGTGTTGCAAATTGCGAGACCACCTTATATTCCTGAAAATGAGGTTGAGAACAAAGTGGGTTTCAGCAAAAGTGACGTGGAAGTGTTCGTGGACGAGGTTTTTTTTCCAACGAGTGATGAAACGGTGTTGGAAAAGAAGGGTGGTAATGATGATGTTGGAGAGAATAACAATAACAAAAACAAAACGGCGTGGGTTGATGAATTGAGTCATGTTCCCACCGAGAAGACGGAGAAGAATAACGATTTTTTAATTTTTTGA 1308 0.5023 MNDGGDSAKPLDFENLTVVSAVGRGAKGVVFLARTGERSSSSECVALKVISKALILQKKKERLLVLNDDKNEYSRVSFEERVLRRFDHPLLPRLRGVFETDKVVGFAIDYCHGGTLHSLRKKQTEKMFSDVTIRFYAVELVLALEYLHNLGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNPKTPHSLSPNSSPSPKSVKPARKQSLTRFYSFCNSGISPCDSDSEPPLGSVNSARRTESDSVEKSNSFVGTEEYVAPEIVSAKGHGFSVDWWSYGVVLYEMLYGTTPFKGANRKETFYRILTKEPELAGEKTALRDLIGKLLEKDPDRRIEVDEIKGHDFFKGVKWDTVLQIARPPYIPENEVENKVGFSKSDVEVFVDEVFFPTSDETVLEKKGGNDDVGENNNNKNKTAWVDELSHVPTEKTEKNNDFLIF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1577 435 MobiDBLite consensus disorder prediction 223 238 - -
Aed2g1577 435 PANTHER FLIPPASE KINASE 1-RELATED 9 404 - -
Aed2g1577 435 ProSiteProfiles AGC-kinase C-terminal domain profile. 344 435 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed2g1577 435 Gene3D Transferase(Phosphotransferase) domain 1 115 184 - -
Aed2g1577 435 SUPERFAMILY Protein kinase-like (PK-like) 14 368 IPR011009 -
Aed2g1577 435 SMART serkin_6 16 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1577 435 ProSiteProfiles Protein kinase domain profile. 16 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1577 435 Gene3D Transferase(Phosphotransferase) domain 1 243 362 - -
Aed2g1577 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Aed2g1577 435 MobiDBLite consensus disorder prediction 223 249 - -
Aed2g1577 435 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 9 404 - -
Aed2g1577 435 Pfam Protein kinase domain 18 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1577 435 Pfam Protein kinase domain 244 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1577 435 Gene3D Phosphorylase Kinase; domain 1 16 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1577 Aed-Chr2 19858444 19861227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1577 8 435 AGC Kinase Gene Family AT3G25250 56.120 1.30e-155 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed2g1577 Pkinase 7.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1577 K20714 - gmx:100785773 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1675 9 20245369 20247944 Aed2g1577 2 19858444 19861227 PCT