Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1573 ATGCTTCGGTTTCTCTCAACTGGGCCAAACATTTTCCAGTCTTTTCCACTGCGAGTGTTCACGTCCGCCACCTGTTCGACGATTGGCCTCACCCAAACCAAGGTTGAATTTGAAGATGATAAAAACAAATGGAGCAACGCTGGTGAGCTTTTGAGCAAATGGGGTTGCAGTGATGGTGATTTGGTGAGAATATTCTCGCGCTGCCCCTCGTTGCGCAATGCTGATCCCATGCAGGTTCAGTCGAAACTGTGCCTGCTGAGTGATTTGGGCTTATGTGCTTCTCAACTTGTCAAGATTGTCAATTGCAGGCCGCGGTTTTTCCAGTCGCGCATTAACAGTTGCTTGGAAGAGAGGATGGCACATCTCACATCGTTGTTTGAGACGAAAGAGGTGCTTCAGAAGGCCATTGTGAGGAACCCGTCGTTGCTGCTATCAGAGGGTCGCTATAATGTTAAGGCCACAGTTGAGCTCTATGAGAACTTGGGTGTTAAGAGAGGGGACTTGATTCAGATGCTCCTATTGCGGCCCACAGTTATTTCGAGGACTTCGTTCAATGCTGAGAAGCTGGAGTATCTAAGCAAGACTGGGCTTACCAAGGATTCCAAGATGTATAAATATGTGGTGACATTAATAGGAATCTCTCGCGTGGAAACCATTCGGGATAAGGTGGCGAATTTCGTGAAGTTTGGATTTTCCGAAGAGGAGATATTTGGTCTTGTGGGGAGGTCTCCTATTGTGTTGACATTGTCGACTGAAAAGGTTCAGAGGAACATGACTTTTGTTTTGGGCACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCAGCCGCATCTCTTGTATGCCAATGTGGATACTGTTTTGAAGCCAAGAGTGCTTCTAGCTTTAAGGATGCAAGAGTTGGATTTGAAGTTGCAAATCACCGGATCAACGATGGTGAGCTCACTGAGGATGCCAGAGCAGAGATTCTTAAGGTTGTTTGTCAAATGCCATGATGAGGATGTTGGCAATGAATTGATGGAATTCTATAAAAGGACAAAAGAGGTTAAGAGATTAGGAGAGTCATCAAAGAAGTTCACTAAGAGAGGATTCCCTTTCTGA 1098 0.4545 MLRFLSTGPNIFQSFPLRVFTSATCSTIGLTQTKVEFEDDKNKWSNAGELLSKWGCSDGDLVRIFSRCPSLRNADPMQVQSKLCLLSDLGLCASQLVKIVNCRPRFFQSRINSCLEERMAHLTSLFETKEVLQKAIVRNPSLLLSEGRYNVKATVELYENLGVKRGDLIQMLLLRPTVISRTSFNAEKLEYLSKTGLTKDSKMYKYVVTLIGISRVETIRDKVANFVKFGFSEEEIFGLVGRSPIVLTLSTEKVQRNMTFVLGTMKLDAKMVLKQPHLLYANVDTVLKPRVLLALRMQELDLKLQITGSTMVSSLRMPEQRFLRLFVKCHDEDVGNELMEFYKRTKEVKRLGESSKKFTKRGFPF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1573 365 Gene3D Transcription termination factor 3, mitochondrial 122 343 IPR038538 -
Aed2g1573 365 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 SMART mt_12 269 301 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 SMART mt_12 62 92 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 SMART mt_12 169 198 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 PANTHER CGI-12 PROTEIN-RELATED 14 365 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 365 - -
Aed2g1573 365 Pfam mTERF 112 322 IPR003690 GO:0003690|GO:0006355
Aed2g1573 365 Pfam mTERF 50 143 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed2g1573 mTERF 6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1573 K15032 - gmx:100799629 639.802