Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1566 ATGAGAAGAGGATGCCAGTTAAGCAAAAATGCTAAAATTGAGGAATCTCATGCTCTCCGAAGAGAGATTACAAGGCATTGTTCTGAGTTCCTATTCCTGAAGGCCATTTTGAATCTCTTGATCTTAACTACTGGGGATTGGTATTATCAAAGTCTGAATACAAATTCAAAATCGGTAAATAGTGTCAGCCCTTGCAAGTTGAAGGGTGTCCAAGTGGTTCCTTTAGAAGAGAGAAGTATCTTAGAGGAATCTGTGGAAAATGGAACTCAAATTCTGACTGAGGGGAACAATTATTGGATGCGGCAATGTGAAGTGGTAGAACAGTTAAGCCTGTTGCTGAAGGATGATGAGGAAGCCAGGATTTTTGTTGAATCACTTTTGCAGTTTTTGCAATCCGCAGAAATTATGTTATCTGCTGGAGTATTATCATTGTTGGAGGAAATGATTTCTAAAACTAGTTCTTATGATTGGCATGAGTCAGTTCCTAATCCAGCTTCTTCAATATGTCTGACTCTGATGTTCAATGCAAGAAAGATTCTCTCAATGCTCTTTATAATAATCTTTCTACTGTACCCTCCAATATTCCATATCTCCTTTCCTCTTGCATCATTGCCTCATTGGTGGCTTACAATCCATTCTTGTAGGCGAGGGGTGGAAATCCTATCAACTCCTGAACTAATTAGTGCATTGACTTCGATATTGGACACTGACGAACTCTTAAAACAGGAGCAAGCTGTCTCAATATCAGTAGATTGGACTGCAAGAACAGAAAAGCTCAGAAGCTCTTGA 789 0.3929 MRRGCQLSKNAKIEESHALRREITRHCSEFLFLKAILNLLILTTGDWYYQSLNTNSKSVNSVSPCKLKGVQVVPLEERSILEESVENGTQILTEGNNYWMRQCEVVEQLSLLLKDDEEARIFVESLLQFLQSAEIMLSAGVLSLLEEMISKTSSYDWHESVPNPASSICLTLMFNARKILSMLFIIIFLLYPPIFHISFPLASLPHWWLTIHSCRRGVEILSTPELISALTSILDTDELLKQEQAVSISVDWTARTEKLRSS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1566 262 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 47 133 - -
Aed2g1566 262 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 219 257 - -
Aed2g1566 262 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 134 157 - -
Aed2g1566 262 PANTHER U BOX DOMAIN-CONTAINING 134 157 - -
Aed2g1566 262 PANTHER U BOX DOMAIN-CONTAINING 219 257 - -
Aed2g1566 262 PANTHER U BOX DOMAIN-CONTAINING 47 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1566 Aed-Chr2 19436218 19437795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1566 51 248 U-box Gene Family AT1G27910 30.526 1.87e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1566 - - gmx:100794099 146.362