Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1557 ATGGACGAGGATTTCGACATGGCGGCGGCGGCGCAGTCCATGGGCGGCGAGGAGGGCTTCGACTTCGCCGGCGGCGACCTCGGCGGCGGAAGCAACCCCGTCCTGAAGGTCGGCGAGGAGAAGGAGATTGGAAATGAGGGTTTGAAGAAGAAGCTCCTCAAGGAAGGTGAAGGATGGGATACTCCTGATGCTGGTGACGAAGTTCAAGTTCACTATACTGGGACGTTGCTTGATGGCACTAAATTTGATTCCAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGGACAAGTTATTAAAGGATGGGATCAAGGTGTTATAACAATGAAGAAAGGTGAAAATGCCCTCTTCACAATCCCAGCTGAGCTAGCATATGGCGAATCTGGTTCTCCTCCAACAATTCCCCCTAATGCAACTCTTCAATTTGATGTGGAGCTGTTGTCTTGGACTAGTGTAAAGGACATATGTAAGGATGGAGGTTTATTTAAGAAGATACTTACTGAGGGAGAGAAATGGGAGAACCCAAAGGATCTTGATGAAGTCTTAGTGAAGTATGAAGCACGTCTTGAAGATGGAACTCTTGTGGCAAAATCTGATGGAGTGGAGTTCACGGTCAACGATGGTCATTTTTGCCCTGCTTTTTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGCTTCTGACAGTGAAGCCACAATATGGATTTGGTGAGAAGGGTAAGCCAGCACACGGTGATGAAGCTGCAGTTCCACCAAATGCAACATTGCAGATTACTCTTGAGTTAGTCTCTTGGAAGATTGTGTCAGAAATAACTGATGACAAGAAGGTCATTAAGAAGATCCTCAAGGAAGGGGATGGATATGAGCGGCCAAATGAGGGAGCCATTGTGAAATTGAAAATAGTTGGTAAGCTGCAAGATGGTACTTTGTTTTTGAAAAAGGATCACGGTGACGAAGGGGAGCTGTTTGAATTCAAAACGGATGAGGCAGAGCAAGTAATTGATGGGCTTGACAGAGCTGTGTTGACTATGAAGAAGGGTGAGGTAGCATTGTTGACTATAGCGCCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCAGGAACTTGCTGTGGTTCCACCTAACTCCACATTATATTACGAGGTTGAGCTAGTATCATTTGAGAAGGAGAAGGAGTCATGGGACATGGACACGCCAGAGAAGATTGAAGCAGCTGGTAAGAAGAAAGAAGAAGGAAATGCATTATTTAAAGCTGGTAAATATGCAAGAGCTTCTAAAAGATATGAGAAGGCTGTAAAGTTCATAGAATATGATACCACCTTTAGCGAAGAGGAGAAGAAGATCTCCAAAGCCTTGAAGGTTGCGTGTAATCTTAACAATGCAGCATGCAAGTTGAAATTAAAAGATTACAAACAAGCAGAGAAATTGTGCACAAAGGTACTGGAGCTTGAAAGTACTCATGTGAAGGCTCTCTATAGAAGGGCTCAGGCATATATGGAGTTGGCTGATTTAGATTTGGCTGAATTTGATATTAAGAAAGCTCTTGAGATTGACCCTAACAACAGAGATGTCAAGCTTGAGTACAAGACTTTGAAGGAAAAGATGAAGGAGTTCAACAAAAAAGAGGCAAAATTTTATGGAAATATGTTCAACAAAATGCACAAGCTAGATTCTCTTGACAGTAATAAACTAGCGTCGAAGGATGCCCAACCCGTGAACATTGACAGCACGGCATAA 1749 0.4368 MDEDFDMAAAAQSMGGEEGFDFAGGDLGGGSNPVLKVGEEKEIGNEGLKKKLLKEGEGWDTPDAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQGQVIKGWDQGVITMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKILTEGEKWENPKDLDEVLVKYEARLEDGTLVAKSDGVEFTVNDGHFCPAFSKAVKTMKKGEKVLLTVKPQYGFGEKGKPAHGDEAAVPPNATLQITLELVSWKIVSEITDDKKVIKKILKEGDGYERPNEGAIVKLKIVGKLQDGTLFLKKDHGDEGELFEFKTDEAEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTLYYEVELVSFEKEKESWDMDTPEKIEAAGKKKEEGNALFKAGKYARASKRYEKAVKFIEYDTTFSEEEKKISKALKVACNLNNAACKLKLKDYKQAEKLCTKVLELESTHVKALYRRAQAYMELADLDLAEFDIKKALEIDPNNRDVKLEYKTLKEKMKEFNKKEAKFYGNMFNKMHKLDSLDSNKLASKDAQPVNIDSTA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1557 582 MobiDBLite consensus disorder prediction 1 25 - -
Aed2g1557 582 PANTHER PEPTIDYLPROLYL ISOMERASE 1 276 - -
Aed2g1557 582 Pfam Tetratricopeptide repeat 492 525 IPR001440 GO:0005515
Aed2g1557 582 SUPERFAMILY FKBP-like 273 409 - -
Aed2g1557 582 Gene3D Tetratricopeptide repeat domain 395 552 IPR011990 GO:0005515
Aed2g1557 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 65 153 IPR001179 GO:0003755
Aed2g1557 582 Coils Coil 525 545 - -
Aed2g1557 582 SUPERFAMILY FKBP-like 41 158 - -
Aed2g1557 582 Gene3D - 156 270 IPR046357 GO:0003755
Aed2g1557 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 298 392 IPR001179 GO:0003755
Aed2g1557 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 181 270 IPR001179 GO:0003755
Aed2g1557 582 ProSiteProfiles TPR repeat profile. 492 525 IPR019734 GO:0005515
Aed2g1557 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 267 IPR001179 GO:0003755
Aed2g1557 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 389 IPR001179 GO:0003755
Aed2g1557 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 61 150 IPR001179 GO:0003755
Aed2g1557 582 SUPERFAMILY FKBP-like 157 270 - -
Aed2g1557 582 Gene3D - 271 393 IPR046357 GO:0003755
Aed2g1557 582 Gene3D - 38 155 IPR046357 GO:0003755
Aed2g1557 582 PANTHER PEPTIDYLPROLYL ISOMERASE 392 562 - -
Aed2g1557 582 PANTHER PEPTIDYLPROLYL ISOMERASE 279 391 - -
Aed2g1557 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 276 - -
Aed2g1557 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 392 562 - -
Aed2g1557 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 279 391 - -
Aed2g1557 582 SUPERFAMILY TPR-like 398 557 IPR011990 GO:0005515
Aed2g1557 582 SMART tpr_5 409 442 IPR019734 GO:0005515
Aed2g1557 582 SMART tpr_5 458 491 IPR019734 GO:0005515
Aed2g1557 582 SMART tpr_5 492 525 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1557 Aed-Chr2 19264879 19270555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1557 35 566 Calmodulin-binding Proteins AT3G25230 83.083 0.0 894