Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1550 ATGGAAAGATATAAAATTTTGAGAGAGCTTGGGGATGGTTCTTGCGGTCATGTATATAAAGCCTGTGATTTGAGAACAAATGAGATTGTTGCTGTGAAAAGGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACACAAATTTAAGAGAAATTAAGGTCCTCCGTAAAATGAATGACCCAAATATCATAAAGTTGAAAGAGGTTGTTAGAGAAAATAATGAATTATTTTTCATTTTTGAATACATGGATTGTAATCTTTATCAATTAATAAAGGAGAGAGAAAAGCCATTTTCAGAGGAAGAGATACGGTGCTTGATGAGGCAAGTGCTACAAGGACTTAGTCACATGCATAAGAAAGGATTCTTTCATCGGGATTTAAAGCCTGAGAATTTGCTGGTAACATATGATGTTTTGAAAATTGCTGATTTTGGACTGGCTAGAGAAGTATCATCTATGCCTCCATACACTCAATATGTTTCCACACGGTGGTATCGAGCACCAGAAGTTTTGTTGCGAGCCCCTTGTTATACTCCTGCTGTTGATAGTGAGCTGGTGTTTGTTTTGGGAGCTATCATGGAATGGTTTTGGAGGCTAAAGTTAAAATTTGTAGTTTCTGCCTCAATCTGTGAAATAGATCAACTGTACAAAATATACGGCATTCTGGGTATGCCAGATTCCACTGCTTTCACTGTAGGGGCAAACAACTCTCAGTTATTGGACCTAGTTGCTCATGAAGTTGTTCCACCTGTGAAGCTTTCTAATATTATTCCGAACGCTAGTTTGGAGGCTATAGACTTGATCACAGTGGATGCATGGGTTCCTTGTCCACTCAGTGATCCACTTGAGCTGAAGCTGAGTAGCAAAAGGGCAAAGCCAAATCTTGAGCTGAAACTGCAGGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACTTTAGGTGTAAAACCCAGTGTTTCAAACTTAGACATGGTCCAAAATGTATCTCAGGGTGTCAGAGAGAACATGCTATTTTGCTCAGATTTTAATGATCATTCAGACCAATCAGTATTTTGGACATTATTATCTCCTGATCAGAATGGAGTTCATAACTCAGCGGAGACTTCGTTGTCATTGTCTTTCAGTTCAGTACAACATCCGCCAATGGGAGTTCCACAATCTGCGGGATTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACCACACCATTTTTGGCTCTCTCTTCTCCCTTTCAGCGTGGCCACTGCCTTTGA 1257 0.397 MERYKILRELGDGSCGHVYKACDLRTNEIVAVKRLKRKFCFWEEYTNLREIKVLRKMNDPNIIKLKEVVRENNELFFIFEYMDCNLYQLIKEREKPFSEEEIRCLMRQVLQGLSHMHKKGFFHRDLKPENLLVTYDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLRAPCYTPAVDSELVFVLGAIMEWFWRLKLKFVVSASICEIDQLYKIYGILGMPDSTAFTVGANNSQLLDLVAHEVVPPVKLSNIIPNASLEAIDLITVDAWVPCPLSDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLGVKPSVSNLDMVQNVSQGVRENMLFCSDFNDHSDQSVFWTLLSPDQNGVHNSAETSLSLSFSSVQHPPMGVPQSAGFSFQPLQPNILTTPFLALSSPFQRGHCL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1550 418 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 274 - -
Aed2g1550 418 SMART serkin_6 4 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1550 418 SUPERFAMILY Protein kinase-like (PK-like) 1 268 IPR011009 -
Aed2g1550 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Aed2g1550 418 Gene3D Transferase(Phosphotransferase) domain 1 82 267 - -
Aed2g1550 418 ProSiteProfiles Protein kinase domain profile. 4 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1550 418 Pfam Protein kinase domain 4 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1550 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 274 - -
Aed2g1550 418 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1550 Aed-Chr2 19182069 19191304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1550 1 268 Core Cell Cycle Gene Families AT1G66750 36.996 6.93e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aed2g1550 Pkinase 4.5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1550 K08829 K08830 gmx:100792842 731.48