Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1494 ATGATGCTTTTGCAGTCGAGATTGAGGGCAGTGATACTGGTGGCTGAGTTTGCAGAGATGGTGTGCGCGCATGGGTTGCAGTGTGTGCATAGGGGTTGTGGAGCTACTGAAGCTGTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACATGTTAGAAACGTCAAACAAAGCCTCTCAGGATGTATCTCCTGTCATAATTCGAGGTGTACAATTTGACTTTAGCACAGATCTCTCTAAGATCAAGCCTTTGGCTGAGGGTGATGATGGCTTCGATGCAAGCTCAGTATCATGTTCATACTTTTCCATCAGCAGTAAAGTAGGCTCACCAGTGTTTTCAGCAGAGATACTATCCAAGTTAGTGTTCTCTAATAGCTTAGGGTCATCATCAACTTCTACTGTGCCTATTGCAGAATACTTTCCAGATCATGCAGCTGGTCGCACCTCCGATGCCTATCGTACATGGCGTCGACAAGATCAATTGCTTCTCACGTGGATTCATCCTCCTGGGATTCTACATCCAATAACTGTTTTCTATGAACTGAGTTTTGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTGCACTCAAGATTGGGATTACCATATGATCGTCCCCTTCTAAGAATTTATTCAACTTTGCTCAGAGATGTACACATTGGGATTCCAAGTAGTGGGGTTACTGGGGGAACTGTTTCCCTTGTTCAAGGTTCTTATGAATACTTCCATTATCTTCATGAGGGTTATAATGATTCGGGATGGGGTTGTGCTTACCGCTCTCTCCAGACTATCATTTCATGGTTTAGACTTCAAAACTACACATCCATAGAAGTTCCTTCTCATAGGGAAATACAGCAGACACTTGTTGAGATTGGTGATAAAGACCTTTCTTTTGTTGGATCACGAGAATGGATCGGTGTCATTGAATTGAGCTTTGTTTTAGACAAACTTCTGGGTGTTACGTGCAAAGCCATCAATGTTAGATCTGGAGCTGAGCTTCGGGAAAAATGTCGAGAGCTAGCGATGCACTTTGAGACCCAAAGTACACCTGTTATGATTGCTTTGAAAGCGGATTATTCTCCTCCATATCATCGAAAACCTATAAGCAAGCAAGCAAACTGCACTGAAAGTGATGCAATTTCTGATGATTCACTTGATGATGATGATCACATGCAGCATAGGAGGAATGTTAATGTTGAAAGAGCTAAATTTATTGACAATGATGTTGTTTCCAATGATACAGTGGACTGTGATTCTGATTGGGAAGAAAGGGAAGAACTTAGCAGCAAGCAAGTTGAAGATACAGAGAGAGATGCAACTTCAGAGGATTCTTTGGATGTTGATTCTCTTCAGTTGCCTAGGAAGATTTCCAGAGCCAAGCATGCCAAAAACATCAGTGAAGAAGATATAATTTCTGATGACCAAGTGGAGATTCCTCTTCAAAAGCAGCAAAGGAGAATTCCTAAAAGCAGGCAAGGCAAACTAGAGCTGAAAATGAAGAAGCAGCAACAGAGGAATCCCAAAAGCAGGCAAGCCAAATACCCCAATGAAGAGGATATTGTATCAGATGACCAATTGGAGGACCATTATCGTAGACATCAAAGAAGGAATCCTAAAGGCAGACAAGCCAAATGTGAAGCAGGGGAAGATGAAATGTCTGATGACCAATTGGAGGATCATTGTCAGAAGCAACAAACAAGTTTCTCTAGGAAAAGGCAAAACAAAGGCATTGATAGAGAAGTTAAAAATGAAATGTCTGATGACCAATGGGGGGATCATTTTCTGAAGCTACCGAGAAGATTACCTAAGAGCAAGCAAAACAAACAGACAAATAAAGAAGTCATGGATGACTTAGCTGCGAATAATTCTCAATTGCTGCACAGAACTCCTAAAAGGAAGCAAGCTATATGCATGGACGAAGATGATATGAATTCAGTTGATGAAATGGAAGATGATCAGCAGCTGAGGAGAACTCTTCGAAGTAAACAAGGTAAACCAAAGACACTTCAACAGCTGAAACAAGCTAATTCCCTCCAAGTGAAAAAGCAAGCAGCTCTGACCATAAAACAGGGGTCTCAGATGGTTGTGGAATCAAAGGCTCCTCAGCAAATAAAACAGCCTGCTCATTTGCGGAATAAGCAATCTAATAACACCCAGGAATTTAGTATAGACATGGAAGAGGAGGAGGAAGGTGGACCTAGCACGCGCCTTAGGAAGAGAGCCACAAAAGCTCAGGAATCTGAAGGAAAATTGAAAGCCAAGCAAACAAAAACAAAAAGGAAGAAGGTGAAGAATGCTGCAGCTACAAAGGTTTCAGTTGACCATTCCAAAATGAAGGATGGGGAAGCAGAATATCAGTGTGATATTGATGATTGCACTATGAGTTTTGGGTCAAAACAGGAGCTTCTGCATCATAAGAGAAATATCTGCCCTGTAAAAGGGTGTGGGAAGAAGTTTTTCTCACACGAGGATGAGCGCCCTTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGA 2535 0.4213 MMLLQSRLRAVILVAEFAEMVCAHGLQCVHRGCGATEAVIAKLRDPQAVYMLETSNKASQDVSPVIIRGVQFDFSTDLSKIKPLAEGDDGFDASSVSCSYFSISSKVGSPVFSAEILSKLVFSNSLGSSSTSTVPIAEYFPDHAAGRTSDAYRTWRRQDQLLLTWIHPPGILHPITVFYELSFGETEMKQVEVRRSLHSRLGLPYDRPLLRIYSTLLRDVHIGIPSSGVTGGTVSLVQGSYEYFHYLHEGYNDSGWGCAYRSLQTIISWFRLQNYTSIEVPSHREIQQTLVEIGDKDLSFVGSREWIGVIELSFVLDKLLGVTCKAINVRSGAELREKCRELAMHFETQSTPVMIALKADYSPPYHRKPISKQANCTESDAISDDSLDDDDHMQHRRNVNVERAKFIDNDVVSNDTVDCDSDWEEREELSSKQVEDTERDATSEDSLDVDSLQLPRKISRAKHAKNISEEDIISDDQVEIPLQKQQRRIPKSRQGKLELKMKKQQQRNPKSRQAKYPNEEDIVSDDQLEDHYRRHQRRNPKGRQAKCEAGEDEMSDDQLEDHCQKQQTSFSRKRQNKGIDREVKNEMSDDQWGDHFLKLPRRLPKSKQNKQTNKEVMDDLAANNSQLLHRTPKRKQAICMDEDDMNSVDEMEDDQQLRRTLRSKQGKPKTLQQLKQANSLQVKKQAALTIKQGSQMVVESKAPQQIKQPAHLRNKQSNNTQEFSIDMEEEEEGGPSTRLRKRATKAQESEGKLKAKQTKTKRKKVKNAAATKVSVDHSKMKDGEAEYQCDIDDCTMSFGSKQELLHHKRNICPVKGCGKKFFSHEDERPLEGMQDDFQVGMGSY 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1494 844 MobiDBLite consensus disorder prediction 491 505 - -
Aed2g1494 844 Gene3D Classic Zinc Finger 755 811 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 615 631 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 694 756 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 425 446 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 417 450 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 666 680 - -
Aed2g1494 844 Gene3D - 212 378 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 542 601 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 694 723 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 478 680 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 367 392 - -
Aed2g1494 844 ProSiteProfiles Zinc finger C2H2 type domain profile. 787 829 IPR013087 -
Aed2g1494 844 PANTHER - 167 355 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 513 535 - -
Aed2g1494 844 MobiDBLite consensus disorder prediction 731 755 - -
Aed2g1494 844 Pfam Peptidase family C78 233 357 IPR012462 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1494 Aed-Chr2 17597848 17611334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1494 713 831 C2H2 Transcription Factor Family AT3G48430 38.621 1.25e-18 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed2g1494 Peptidase_C78 2.7e-34 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1494 K01376 - gmx:100775271 739.184