Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1489 ATGGCTGCTCCAAAAGTAGATGTAGACATTGATATACAGTCCACCGAATCATTCCCTATCACAGAAGAGATGAGAATCAAAGCACAGAGTTTAAGGGTTCAAGAGCGCAAGAGGAAAGAGGAGGAAGAGAAAAGATTGGAGAGAGAAAGGGAGAAGGAGAGGATTCAAGCTGGTAAGAGGCTCCTTGAGGCAAAGCGAATTGCAGAAGAAAATGAAAGAAAACGGAATTTATCATTGAGAAAAGCAGAAAAAGAAGAAGAGAAAAAAGCTAGAGAAAAAAAGTCAAAGCCTGTTTATACAACTGCAAAAGTTGATCAGTTAAGAGAATGTCTGAGGAATCTCAAGCGTAACCAACAGACACTTTTAGTCTATGTTGGAAATGTTGCCAAGAATCCCAATGAGGAAAAGTACAGAAAAATTCGACTGAACAACCCATTATTCCAGGAAAGAGTTGGAAGTTTAAATGGAGGTGTAGAGTTTCTTGAGCTCTGTGGTTTTGAGAGAACGAGTGACTTTTTACATCTTCATGATGAAAAGGTTGACATGGAGCTGCTAAATTCAGCTGGTCTTGTCCTAAATTCTGCAATGACAAACCCTTTCTTTGGAGTTTTGAGTACTTCTACTCACAATTAA 633 0.3886 MAAPKVDVDIDIQSTESFPITEEMRIKAQSLRVQERKRKEEEEKRLEREREKERIQAGKRLLEAKRIAEENERKRNLSLRKAEKEEEKKAREKKSKPVYTTAKVDQLRECLRNLKRNQQTLLVYVGNVAKNPNEEKYRKIRLNNPLFQERVGSLNGGVEFLELCGFERTSDFLHLHDEKVDMELLNSAGLVLNSAMTNPFFGVLSTSTHN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1489 210 Coils Coil 31 56 - -
Aed2g1489 210 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 92 206 - -
Aed2g1489 210 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 4 93 - -
Aed2g1489 210 Pfam PUB domain 115 181 IPR018997 -
Aed2g1489 210 PANTHER F13M7.16 PROTEIN 92 206 - -
Aed2g1489 210 PANTHER F13M7.16 PROTEIN 4 93 - -
Aed2g1489 210 MobiDBLite consensus disorder prediction 30 53 - -
Aed2g1489 210 SMART PGNneu 116 177 - -
Aed2g1489 210 Coils Coil 67 94 - -
Aed2g1489 210 SUPERFAMILY PUG domain-like 113 200 IPR036339 -
Aed2g1489 210 Gene3D - 100 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1489 Aed-Chr2 17498433 17512284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1489 4 204 C2H2 Transcription Factor Family AT1G04850 48.221 9.86e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1489 - K24348 gmx:100781260 295.049