Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1474 ATGACTACTCCTCCAAAAGACGCGGCATCATCCTCCCCAACGAACATCACGACGACTAAGAAGCCCCAGCCCATCCCCTGGACCCATCAGGAGACCGTCCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCCCTCAAGCGGGGCCCACTCCGCCACAACCAGTGGGAGGAGGTCGCCGTCGTCGTCGCCGCCCGCTGCGGCTACGACCTCTCCCACCCCGCCAAGTCCGCCCTCCAGTGCCGTCACAAGATGGAGAAGCTCCGCCAGCGCCACCGCGCTGAGAAGAAGCAAGCCGCCGCCTCCCTCCGCCCCGGCTTCTGGCAGTACAACGCCCTCATGAACGACCTCGAGCGCGGCCCCCTCCCCATCTCCTCCCTCGCCCCTCTCAGAAACGACGAAAACGACGACACCGACGACGAAAACGACGACATCTACCATCAAAATCATAATCAAAACGACAATTATGGCGACGACGAGGATTTCATTAACATCAAGTCCAAGAGTATTAACTGTATCCTCAGCGAGAGGCCGGTGAGAATGAGAAGCTTCGAGAGAGGGTTTTTGAGGGAGCGCGCTGTTGTTGTTGTTGAAGAAGAAGAGGACGATGACGAGGACAACCACAACGACGACGTTTTGGGGTTGTCCGCGGAAATGAGGGCTTTCGCGGAGGGGTTTATTGGAATGGAGAGCTTGAAGCTGGAGATGATGAAGGAGACGGAGAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATACAGATGATTCTCGAATCGCAGAGAAGGATCGTTGACTCCATTGGGAGGGCCTTTGGATACCAAAGAAATCTTGAAAGTTTCACCATTTATTTTGATCTTGCTAATTTGAAAGATCTGCTTCTTTTAAGGTCTTCCCTACAGAACATTGGAAACCAAGAAGCATTTGAAGAGGTTGCTGTAGCTGCTGCTTTCGCCAATTTTCAACAATTGCATATTTCCAAATGTTGA 984 0.5346 MTTPPKDAASSSPTNITTTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLSHPAKSALQCRHKMEKLRQRHRAEKKQAAASLRPGFWQYNALMNDLERGPLPISSLAPLRNDENDDTDDENDDIYHQNHNQNDNYGDDEDFINIKSKSINCILSERPVRMRSFERGFLRERAVVVVEEEEDDDEDNHNDDVLGLSAEMRAFAEGFIGMESLKLEMMKETERCRLEMEKKRIQMILESQRRIVDSIGRAFGYQRNLESFTIYFDLANLKDLLLLRSSLQNIGNQEAFEEVAVAAAFANFQQLHISKC 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1474 327 Gene3D - 27 94 - -
Aed2g1474 327 Pfam Myb/SANT-like DNA-binding domain 26 112 IPR044822 -
Aed2g1474 327 MobiDBLite consensus disorder prediction 1 25 - -
Aed2g1474 327 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 5 275 - -
Aed2g1474 327 ProSiteProfiles Myb-like domain profile. 26 89 IPR001005 -
Aed2g1474 327 MobiDBLite consensus disorder prediction 125 158 - -
Aed2g1474 327 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 275 IPR044823 -
Aed2g1474 327 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1474 Aed-Chr2 17310939 17314442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1474 27 100 Trihelix Transcription Factor Family AT3G14180 31.081 2.10e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed2g1474 Myb_DNA-bind_4 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1474 - - gmx:100810821 395.586