Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1468 ATGTCTCTTCCAAGACCCAGTGAGGGTAAATCCCCTTCTTCTCAGCAGAAAGAAGGAGTGGAACCTGTTGCTGATGCTGCAGCCTCATCCTCTTCTTCATGGAATAGGCTACAACGCACTTTCCCTCCTGTATCTCTACACAACATGAGTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGGAGCCACACCAGCAGAGACTCTACTAAATAGTAGTAATAACCTTAATGGTAATGTGACAGACCCTCAATTTCAAACTGCCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGCGAAACAGGGTCTCTGCTCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGAGTTGGAAGCAAGAGCTAAAGAGATGCAAGACAAAAACGATATCTTAGAAGAGCGTATCTCTACTTTAATCAATGAGAACACCATGCTGCGGAAGGTGCTTATGAACGCGAGGCCAAAAGTTGATGATAGCATTGATCAAAAGCAAGACCAGTTAAGTAAGAGCTAA 570 0.4439 MSLPRPSEGKSPSSQQKEGVEPVADAAASSSSSWNRLQRTFPPVSLHNMSSKIEDSDEDMFTVPDVGATPAETLLNSSNNLNGNVTDPQFQTAFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNELEARAKEMQDKNDILEERISTLINENTMLRKVLMNARPKVDDSIDQKQDQLSKS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1468 189 SMART brlzneu 106 170 IPR004827 GO:0003700|GO:0006355
Aed2g1468 189 MobiDBLite consensus disorder prediction 1 62 - -
Aed2g1468 189 Gene3D Single helix bin 129 170 - -
Aed2g1468 189 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 113 128 IPR004827 GO:0003700|GO:0006355
Aed2g1468 189 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 108 171 IPR004827 GO:0003700|GO:0006355
Aed2g1468 189 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 22 189 IPR044280 GO:0000981|GO:0045944
Aed2g1468 189 MobiDBLite consensus disorder prediction 78 108 - -
Aed2g1468 189 MobiDBLite consensus disorder prediction 1 18 - -
Aed2g1468 189 Coils Coil 126 160 - -
Aed2g1468 189 CDD bZIP_HY5-like 120 161 - -
Aed2g1468 189 Pfam bZIP transcription factor 107 166 IPR004827 GO:0003700|GO:0006355
Aed2g1468 189 MobiDBLite consensus disorder prediction 26 50 - -
Aed2g1468 189 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 22 189 - -
Aed2g1468 189 SUPERFAMILY Leucine zipper domain 110 169 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1468 Aed-Chr2 17233833 17238999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1468 69 178 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 63.158 6.64e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed2g1468 bZIP_1 8.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1468 K16241 - gmx:778143 288.5