Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1463 ATGACTGAGGAGAAATCGGAGCAGTGTTGTTTGGAGAATAAGCAAACTAATGCTACTTCTAGCTCTAGTGTATCAGAAAACAGTGGAAGTGCTATACCCAATTCATCAACGAAATGTAAATCAGCATTGCCATCTAATAGGAGGACCACTGGCCCTGTTAGGCGCACAAAGGGTGGTTGGACAGAAGATGATGATGAGACATTATCAAAAGCTGTTCGAGCTTTTAATGGCAAGAATTGGAAGAAGATAGCGGAGTTTTTACCGGGTAAAACAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTCCATCCAGAACTTGTTAAAGGGCCTTGGACTCGGGAGGAAGATGATAAAATAATTGAAATGGTGTCTAAACATGGACCTGTAAAATGGTCTTTGATAGCCAAGTCTTTGCCTGGTCGAATTGGAAAACAGTGCCGAGAACGATGGTGCAATCATATAAATCCTGACATAAAGAAGGATCCCTGGACTTTGGAGGAGGAATTGGCCATTATGGATGCTCATTGTATACATGGAAACAAATGGGCTGAAATAGCTAAGGTTCTTCATGGAAGGACTGATAATGCAATAAAGAACCATTGGAATAGTTCTTTGAAGAAAAAGATGGATTTCTATTTAGCTACTGGAAAACTTCCACCCATTCCAAAGACCAGTGGACAAGTTGCTGTTGAAGATACAGTTACACATTCCACCATTGTATCATCATCTACAACTACTGAGATTACTAAGCTGGATAACAGTGATAAGAATCAACTAGAGTCCACAGGAACAGTTAGAGAGTTTGGTGATTCTTCAAATGTTCCTGCAAAAGAATTGACTGATTCGGACTGCATAGAATGCAGCAATAGATCATCCAACAAAGGTCTCGGCTGTAGTAACTCGGAGCCAGTGTTGCCGGGAGATAATTTTAGAATAAACAGTGAGCCAAAATTTGAGAATCCCGGATTCAATGGCAACCCAAGAATTGATCATTGTATTAATAATAATGGTCAAATCAACAGTGGCAGATTAACCAGAAATTGTTATTCAAAGGAAAGTCAAGCCCTTGGTTCTTTTTGCTATGAGTTTTTTAATATCTCTAGCCTGCAGAATGAGTTTTCTTCTTCTCCAATGATGTCACCTGTTGGTTTCATAACTCCACCTCCCGCAAAGCGAAGTGAATTATGCTTAGAATCTCCTGAAACAATATTGAAAAATGCAGCTAAAACTTTCCCAACTCCTTCCATATTGAGGAAGAGAAGGAGTGTAGTCAAAAGACCTGACACTCCTAGTGAGGTTGGAAAAGGAGTTAATGATTCACATGCTTATAATGAGCAAGAGAGAACAAATGACATTTCTGGTTCTGAAGTTGTGAGGTTACCTGTGAGTCCACCACACCATCATAAGGCTTTCAACGCAACTTCTCCATGCCGATTAAGATCCAGGCAAACAGCCATCAAGTCTTTGAAGAAACAACTTGACTGTGCATTTGACATAGAGAAGCATGCTCATAAGATGAGAAATGTGATTACTAATGGTTCTTTTCATAAGCTAAAATTGGCTGAGACATAG 1575 0.3975 MTEEKSEQCCLENKQTNATSSSSVSENSGSAIPNSSTKCKSALPSNRRTTGPVRRTKGGWTEDDDETLSKAVRAFNGKNWKKIAEFLPGKTEVQCLHRWQKVLHPELVKGPWTREEDDKIIEMVSKHGPVKWSLIAKSLPGRIGKQCRERWCNHINPDIKKDPWTLEEELAIMDAHCIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKMDFYLATGKLPPIPKTSGQVAVEDTVTHSTIVSSSTTTEITKLDNSDKNQLESTGTVREFGDSSNVPAKELTDSDCIECSNRSSNKGLGCSNSEPVLPGDNFRINSEPKFENPGFNGNPRIDHCINNNGQINSGRLTRNCYSKESQALGSFCYEFFNISSLQNEFSSSPMMSPVGFITPPPAKRSELCLESPETILKNAAKTFPTPSILRKRRSVVKRPDTPSEVGKGVNDSHAYNEQERTNDISGSEVVRLPVSPPHHHKAFNATSPCRLRSRQTAIKSLKKQLDCAFDIEKHAHKMRNVITNGSFHKLKLAET 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1463 524 PANTHER MYB PROTEIN-RELATED 363 452 - -
Aed2g1463 524 SUPERFAMILY Homeodomain-like 106 202 IPR009057 -
Aed2g1463 524 PANTHER MYB-RELATED PROTEIN B-LIKE 25 292 - -
Aed2g1463 524 Gene3D - 162 226 - -
Aed2g1463 524 CDD SANT 60 103 IPR001005 -
Aed2g1463 524 Pfam Myb-like DNA-binding domain 109 154 IPR001005 -
Aed2g1463 524 Pfam Myb-like DNA-binding domain 57 103 IPR001005 -
Aed2g1463 524 Pfam Myb-like DNA-binding domain 161 204 IPR001005 -
Aed2g1463 524 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Aed2g1463 524 ProSiteProfiles Myb-like domain profile. 52 103 IPR001005 -
Aed2g1463 524 CDD SANT 163 206 IPR001005 -
Aed2g1463 524 Gene3D - 108 161 - -
Aed2g1463 524 PANTHER MYB-RELATED PROTEIN B-LIKE 363 452 - -
Aed2g1463 524 PANTHER MYB PROTEIN-RELATED 25 292 - -
Aed2g1463 524 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Aed2g1463 524 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 103 IPR017930 -
Aed2g1463 524 ProSiteProfiles Myb-like domain profile. 104 155 IPR001005 -
Aed2g1463 524 MobiDBLite consensus disorder prediction 11 52 - -
Aed2g1463 524 SMART sant 56 105 IPR001005 -
Aed2g1463 524 SMART sant 108 157 IPR001005 -
Aed2g1463 524 SMART sant 160 208 IPR001005 -
Aed2g1463 524 MobiDBLite consensus disorder prediction 1 64 - -
Aed2g1463 524 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 210 IPR017930 -
Aed2g1463 524 MobiDBLite consensus disorder prediction 422 442 - -
Aed2g1463 524 CDD SANT 111 155 IPR001005 -
Aed2g1463 524 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 159 IPR017930 -
Aed2g1463 524 Gene3D - 56 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1463 Aed-Chr2 17120538 17127166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1463 3 487 MYB Transcription Factor Family AT3G09370 44.250 2.22e-119 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g1463 Myb_DNA-binding 7.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1463 K09422 - gmx:100777236 768.074