Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1450 ATGAAGGAAAGGCAACGTTGGAAAGCTGAAGAGGATGCATTGTTGTGTGCTTATGTGAGACAGTATGGTCCTCGGGAATGGAACCTCGTATCTCAGCGCATGAACAAGCCTCTTCACAGGGATGCAAAGTCATGCTTAGAAAGGTGGAAGAACTACCTGAAGCCTGGCATCAAGAAAGGGTCTCTAACCGACGAAGAGCAGCGCCTTGTTATCCGGCTTCAAGAGAAACACGGCAACAAGTGGAAGAAGATTGCTGCAGAAGTTCCGGGGAGAACAGCCAAGAGATTAGGCAAGTGGTGGGAAGTGTTCAAAGAGAAGCAACAAAGGGAGAAGCATGAGATTCACAAAGGGATTATGGGACCTGTTGATGACACCAAATATGATCATATACTAGAGACTTTTGCAGAGAAGCTAGTGAAAGAGCACCACCCTTCACAATCATCATCATCATACCTTGTGACTGCTGCATCATCTAATGGACCCTTTCTCCACACTGATGCACCGACATCTGCATCGTCATCATCACCATTGTTTCCTCCTTGGCTTTCAAATTCAAGCACCATCAATCCCTCACCGGCAATTAGGCCACCTTCCCCTTCTGTGGCACTAAGTCTCTCGCCCTCAGCAGCAATTCCTACTTGGTTGCAACACGAACGAGGAGGACCAGGGAATGTAATGGCAGCACCACATGGTGATAGCAACATGGTGGTGGTGTCGGAGTTGATAGAGTGCTGCAAGTGGTTGGAAGAAGGGCACCACGCCTGGACGGGGCATAGGAAGGAGGTGGCGTGGCGGTTGAGAAGGGTGGAGCTGCAGTTGGAGGCAGAGAAGGCGAGCCGAAGGAGGGAAAAGATGGAGGAGATTGAAGCAAAGATGAAGGCTCTTTGGGAAGAACAGAATGCTGCTTTGGATAGAATTGAAGCGGAATGTAGAGAACAGTTAGCAGGGTTGAGGAGGGAGGCAGAAAGCAAGGAGCAGAAGCTGGTTCAGCAATGGAATGCAAAACACATGAGAGTAGTGAAGTGTATGGAACAAGTTTTATCTTGCAGCATTGAATGCTTGATAAGGGTGAGTTCCCTCTTCAGAGATTCTGTCCCCATGACTTTTTAA 1110 0.4847 MKERQRWKAEEDALLCAYVRQYGPREWNLVSQRMNKPLHRDAKSCLERWKNYLKPGIKKGSLTDEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKHEIHKGIMGPVDDTKYDHILETFAEKLVKEHHPSQSSSSYLVTAASSNGPFLHTDAPTSASSSSPLFPPWLSNSSTINPSPAIRPPSPSVALSLSPSAAIPTWLQHERGGPGNVMAAPHGDSNMVVVSELIECCKWLEEGHHAWTGHRKEVAWRLRRVELQLEAEKASRRREKMEEIEAKMKALWEEQNAALDRIEAECREQLAGLRREAESKEQKLVQQWNAKHMRVVKCMEQVLSCSIECLIRVSSLFRDSVPMTF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1450 369 PANTHER TRANSCRIPTION FACTOR AS1 1 347 IPR031055 GO:0005634|GO:0006351|GO:0010338
Aed2g1450 369 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Aed2g1450 369 Pfam Myb-like DNA-binding domain 7 67 - -
Aed2g1450 369 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Aed2g1450 369 SMART sant 3 55 IPR001005 -
Aed2g1450 369 SMART sant 58 106 IPR001005 -
Aed2g1450 369 Coils Coil 307 327 - -
Aed2g1450 369 Gene3D - 62 117 - -
Aed2g1450 369 CDD SANT 6 53 IPR001005 -
Aed2g1450 369 Gene3D - 4 58 - -
Aed2g1450 369 Coils Coil 266 288 - -
Aed2g1450 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Aed2g1450 369 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 347 - -
Aed2g1450 369 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Aed2g1450 369 CDD SANT 63 104 IPR001005 -
Aed2g1450 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1450 Aed-Chr2 16956352 16959692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1450 1 352 MYB Transcription Factor Family AT2G37630 61.725 1.63e-150 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g1450 Myb_DNA-bind_6 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1450 K09422 - sly:543604 440.654