Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1442 ATGAAAACCTACAGCTACAACGAGCTAAAAACAGCCACAAAAAATTTCTGCCCAGACAGTGTCTTAGGAGAGGGTGGTTTCGGTTCCGTTTTCAAGGGCTGGATTGATGAACATTCACTTGCTGTTACACGACCCGGAACAGGCATGGCTGAAATCAACTATCTTGGGCAACTGCAGCACCCTAATCTTGTCAAGTTGATAGGCTACTGCTTTGAGGATCAACACCGGCTTCTAGTTTATGAATATATGCCCAAAGGCAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTTTCAGCAACTTTCTTGGACTTTGAGATTGAAAATATCCCTTGGGGCAGCAAGGGGTCTTGCATTTCTCCATAGCACTGAAACTAAAGTCATATATCGCGATTTCAAGACTTCCAATATCCTGCTTGATACGAACTACAATGCAAAACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAATTGGTGATAAGAGCCATGTGTCTACAAGGGTCATGGGAACCCATGGATATGCAGCACCAGAGTATCTAGCAACAGGTCACCTAACTCCCAAGAGCGATGTCTATAGCTTTGGAGTAGTTCTTCTGGAAATGTTATCAGGAAGACGTTCCATAGACAAGAACCGGCCATCCGGAGAGCAATGCCTTGTTGAATGGGCAAAGCCTTACCTTTCTAACAAACGCAGAGTTTTTCGCGTAATGGATAGCCGTCTTGAAGGTCAGTATTCCCTTAACCAAGCTCAAAGGGCAGCCACCCTTGCTTTTCAGTGTCTTTCTGTAGAGCCGAAATACCGGCCGAACATGGACGAGGTTGTTAGAGCATTGGAGCAGCTGCGTGAATCAAACGATCAGGTGAAAAATGATCATAAAAAACGCAGAGTAAGTGGCTCCGGCCTTGGCCTTTCCAATGGACTCCATGCATCTACTAGCAAAGGAAGTACAGATGCTCCTAAAATGTTTGCTTATCCAAGGCCCACTGCCTCTCTCCTTTATGCTTAA 1011 0.453 MKTYSYNELKTATKNFCPDSVLGEGGFGSVFKGWIDEHSLAVTRPGTGMAEINYLGQLQHPNLVKLIGYCFEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHSTETKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTPKSDVYSFGVVLLEMLSGRRSIDKNRPSGEQCLVEWAKPYLSNKRRVFRVMDSRLEGQYSLNQAQRAATLAFQCLSVEPKYRPNMDEVVRALEQLRESNDQVKNDHKKRRVSGSGLGLSNGLHASTSKGSTDAPKMFAYPRPTASLLYA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1442 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Aed2g1442 336 ProSiteProfiles Protein kinase domain profile. 16 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1442 336 Coils Coil 272 292 - -
Aed2g1442 336 MobiDBLite consensus disorder prediction 305 319 - -
Aed2g1442 336 Pfam Protein kinase domain 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1442 336 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Aed2g1442 336 MobiDBLite consensus disorder prediction 286 323 - -
Aed2g1442 336 PANTHER OS01G0588500 PROTEIN-RELATED 1 315 - -
Aed2g1442 336 SUPERFAMILY Protein kinase-like (PK-like) 3 283 IPR011009 -
Aed2g1442 336 Gene3D Transferase(Phosphotransferase) domain 1 83 302 - -
Aed2g1442 336 PANTHER KINASE 1B 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1442 Aed-Chr2 16707158 16710317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1442 2 279 Glycoside Hydrolase AT3G07070 50.519 8.40e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed2g1442 Pkinase 5.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1442 - - gmx:100795058 613.224