Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1433 ATGAAGACAAAAACTTGTTTACTAGCTACCAGTGCTACTAACCTAGAGGAGGCAGCTTTTGAGGAACAGGAACCTGATTGTTGCGTAATATATCAGGATGAATATCAGAATCAAGACAAGCTTGGAGTTCTTCATTGTGAACACAAATATCATGCAGTCTGTCTGAGGAAATGGTTACCGGAGAAAAATGCAGAAAAATGTCTGCCCCATATGCAAATCAAAAGGATTGACACCAGGAGAGAAGAATTGTATAGACAGCTACTTAGTTAA 270 0.3889 MKTKTCLLATSATNLEEAAFEEQEPDCCVIYQDEYQNQDKLGVLHCEHKYHAVCLRKWLPEKNAEKCLPHMQIKRIDTRREELYRQLLS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1433 89 SUPERFAMILY RING/U-box 21 64 - -
Aed2g1433 89 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 76 IPR013083 -
Aed2g1433 89 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 64 IPR045191 GO:0061630
Aed2g1433 89 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1433 Aed-Chr2 16476381 16476834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1433 23 63 C3H Transcription Factor Family AT2G15530 41.463 5.96e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1433 - K19041 gmx:100808611 96.2857