Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1422 ATGGCTTGTTCCCGCATTCACTTCAACCTTAATCTCTCTTCTTTCCCCTCCGATGCGCCACCAATTCCGTCCACTTGTCACTCTCCCCCTCGCCTCTCTCTTCCCCCTCTCTTCACAGCACCAAAGATCGCTTACTCCAGTGCTCCGCGGCGCACGTGTGGTGCGGTGTGCTCTCAGATGACCATGGAGGAGAAGCCTCTCTCTGAAAACCGAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCTGTTTTGAGGAATGAGCAAACTCCCAGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCCACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCAGTGGAATTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATCTTGAGAGCAGGTCTTGCTCTTGCTGAACATGCATCATCAATCTTGCCTGCAACAAAAACATATCATTTAGGAATAAGCAGAGATGAGGCAACACTTCAGCCAACTATATATTTAAACAAGTTACCCGAGAAATTTCCAGAAGGATCTAAAGTTTTTGTGGTTGATCCTATGCTGGCAACAGGTGGCACTATAGTGTCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAGCAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTTTGGTACAGATACATGA 858 0.4779 MACSRIHFNLNLSSFPSDAPPIPSTCHSPPRLSLPPLFTAPKIAYSSAPRRTCGAVCSQMTMEEKPLSENRMLVYVPPHPLIKHWVSVLRNEQTPSPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGISRDEATLQPTIYLNKLPEKFPEGSKVFVVDPMLATGGTIVSAVSLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSFGTDT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1422 285 CDD PRTases_typeI 139 259 IPR000836 -
Aed2g1422 285 Pfam Uracil phosphoribosyltransferase 76 283 - -
Aed2g1422 285 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 42 279 - -
Aed2g1422 285 Gene3D - 61 283 IPR029057 -
Aed2g1422 285 TIGRFAM upp: uracil phosphoribosyltransferase 74 283 IPR005765 GO:0004845|GO:0006223
Aed2g1422 285 SUPERFAMILY PRTase-like 74 282 IPR029057 -
Aed2g1422 285 PANTHER URIDINE KINASE 42 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1422 Aed-Chr2 15996287 16005465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1422 46 285 PRT Gene Family AT3G53900 75.000 5.66e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1422 K00761 - gmx:100797537 533.872