Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1399 ATGCTCCTCCAGCAGCAGCTCTTGTCTTTGTTGCTGTTCTTTCTTCTTCTGAATCTGATCCCAGTTTCATCTCAGCAGCTCTTCCATGCTGGATTCAAGGGTTTGGGAAGCACCAACATGACCCTTGATGGTGTAGCAGAAATAGAGCCAAATGGGGTACTGAAACTCACAAACGATTCAAGTAAAGTCATGGGTCATGCTTTTCATCCAACCCCTTTTCAGTTCAAGAACTCTAGTGAGGGTGGTAAAGGTAAAGCTTTCTCCTTTTCTTCATCTTTTGCATTGGCTATGGTTCCTGAGTTTCCAAAGCTAGGAGGGCATGGCCTTGCTTTTGCAATTTCACCTTCTAAGGATCTGAATAAGGCTCATCCAAGGTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGGCCAGCTCCACCTCTTGATCTCTCTTCTCTCCCACAACTTCCAGGACCAAAGAAGAAGCACACTTCTCTGATAATTGGGGTTTCAGTCTCTTGTGCAGGCTTCGCCACCGGAATTTGGTTCAGCTTCTGGGGTGGTGTCGTCGCCGTGGTGACCTCCTCCTTGTATATGACTTCATGGAAAACGGGAGCTTGGACAAGCTATATGGCACCTGAGGTCCCTAGGACAGGGAAGGCCACTCCTAGCTCTGATGTTTTTGCATTTGGTGCACTTTTACTAGAGGTGGCATGTGCGCTAAGACCACTCGACCCAAAGGCAATGCAAGAAGATATGGTTTTGATTGATTGTGTTTGGAACAAATTCAAACAAGGGAGAATACTTGATATGGTGGACCCTAAACTAAATGGTGTTTTTAGTGAAAGAGAGATGCTGATGGTGTTGAAATTGGGGCTTCTGTGTTCAAATGGTTCACCCACTGCTAGGCCTAGCATGAGACAGGTGGTGAGGTTTTTGGAAGGAGAAGTCGGCATGCCAGATGAGTTGAGAAAGCCGGGAGAGGGAAGTTACCAAGAGGGTTTTGATGAATTCTTGCACTCACTTGAATCTTCTTCATTTGATCAGATGAGCACAGGATCCTATGGTAGAAAGAGAGACATGGGATCTAGTTTTCCTTCTTTTACCAATACATCTCCTTATACTCTACATGGTAAAGGACAAACAATGTGA 1149 0.4534 MLLQQQLLSLLLFFLLLNLIPVSSQQLFHAGFKGLGSTNMTLDGVAEIEPNGVLKLTNDSSKVMGHAFHPTPFQFKNSSEGGKGKAFSFSSSFALAMVPEFPKLGGHGLAFAISPSKDLNKAHPRLLASSHYILGWSFKINGPAPPLDLSSLPQLPGPKKKHTSLIIGVSVSCAGFATGIWFSFWGGVVAVVTSSLYMTSWKTGAWTSYMAPEVPRTGKATPSSDVFAFGALLLEVACALRPLDPKAMQEDMVLIDCVWNKFKQGRILDMVDPKLNGVFSEREMLMVLKLGLLCSNGSPTARPSMRQVVRFLEGEVGMPDELRKPGEGSYQEGFDEFLHSLESSSFDQMSTGSYGRKRDMGSSFPSFTNTSPYTLHGKGQTM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1399 382 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 208 360 - -
Aed2g1399 382 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 126 174 - -
Aed2g1399 382 PANTHER - 8 124 - -
Aed2g1399 382 PANTHER - 208 360 - -
Aed2g1399 382 PANTHER - 126 174 - -
Aed2g1399 382 Pfam Legume lectin domain 29 122 IPR001220 GO:0030246
Aed2g1399 382 Pfam Protein tyrosine and serine/threonine kinase 194 312 IPR001245 GO:0004672|GO:0006468
Aed2g1399 382 Gene3D - 28 128 - -
Aed2g1399 382 SUPERFAMILY Protein kinase-like (PK-like) 208 325 IPR011009 -
Aed2g1399 382 SUPERFAMILY Concanavalin A-like lectins/glucanases 4 119 IPR013320 -
Aed2g1399 382 Gene3D Transferase(Phosphotransferase) domain 1 184 326 - -
Aed2g1399 382 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1399 Aed-Chr2 14822084 14824153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1399 209 381 Receptor kinase-like Gene Family AT3G55550 43.017 4.23e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed2g1399 PK_Tyr_Ser-Thr 1.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1399 - - gmx:100801247 322.013