Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1392 ATGGCTGCGTTCCTCGGAGTCATCTTTGTGAGCATGGATGTCGGTCTCATGCTCTCTGTTGCACTCAGCATTCTTAGAGCACTTTTATATGTGGCTAGACCTGCGCCATGCAAGCTTGGGAAGTTACAATCTGAAATTGGTTTGTATAGAGACACTGAGCAATATGTTAATATTTCAACATTCCCTGGAGTTCTAGCTGTGCAACTTGGTTCTCCTCTTTACTTTGCAAATACTGTGTACGTCAAAGAAAGGATTATGAGGTATATTCGAAGTGAGGAAGGCTCTTCTGGAGTTGTTGAGCATGTCATACTTGATTTGTCAGCAGTCACGTCCATTGACACAACTGCTATTAAAGGATTGGACGAGTTGGTTAAAGTATTGGGAAATAATGGAGTTAAGGTTTTGTTTGTAAACCCACGTTTGGGGGTGATGGAGAAGCTTATAATATCCAAGTTTGTTGAGAAAATTGGGAAGGACTCGTTCTATCTAATATTGGATGATGCAGTGATGGCGTCAAGGCAATATTCAAGTTGTTCACCAAAGGCAGCGAATAATGGTCCAGAGGGCATGGTTTAA 576 0.4167 MAAFLGVIFVSMDVGLMLSVALSILRALLYVARPAPCKLGKLQSEIGLYRDTEQYVNISTFPGVLAVQLGSPLYFANTVYVKERIMRYIRSEEGSSGVVEHVILDLSAVTSIDTTAIKGLDELVKVLGNNGVKVLFVNPRLGVMEKLIISKFVEKIGKDSFYLILDDAVMASRQYSSCSPKAANNGPEGMV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1392 191 Gene3D STAS domain 49 177 IPR036513 -
Aed2g1392 191 ProSiteProfiles STAS domain profile. 54 172 IPR002645 -
Aed2g1392 191 Pfam STAS domain 55 168 IPR002645 -
Aed2g1392 191 PANTHER SULFATE TRANSPORTER 3.5-RELATED 1 175 IPR030316 GO:1902358
Aed2g1392 191 PANTHER SULFATE TRANSPORTER 1 175 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed2g1392 191 CDD STAS_SulP_like_sulfate_transporter 55 163 - -
Aed2g1392 191 SUPERFAMILY SpoIIaa-like 55 169 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1392 Aed-Chr2 14673544 14674119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1392 1 173 Inorganic Solute Cotransporters AT5G19600 49.711 2.90e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1392 K17471 - gmx:100789107 277.715