Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1390 ATGAATCTTAGAACCATAATCATCATTGCTCTATCTTTTGTTGTAGTCTTGTTGGTTTTGGTTGGAGCATTTTACATCATTTTGAAATGGAGGAAAATTAGGAGACCTTCAAGGGTTGTTGGCCCTACAGTCACATCATATCTAAACAAGAGATCTGGCATGGGATCTTTTATGTTGTCAAGCAAAATTATGAGCTCAAGATCTATGTCCCTTGTGTCCACTATAGCTCATTCTATTCTCTCTGTTAAAACATTTTCCTTTTCTGAGCTTGAGAATGCAACAACTAAGTTCAGTTCTCAAAGAGTATTAAGAGAAGGAGGATTTGGAAATGTTTATTGTGGGGCATTGGATGATGGAAATGAAGTTGCAATTAAGCTACTAACAAGGGATGGTCATAATAGAGACTGTGAATTTGTCACGGAAATTGAGATTCTAAGCCGTTTGCATCATTGTAATCTCGTGAAACTCATTGGTATATGCATAGAAGGGCCAAGGCGTTGCTTGGTGTATGAGCTTGTTAACAATGGCAGTGTTAAGTCTCATTTGCATGGTAAATTGGTTACATATTTTCTTTGGTTTTGGGTGTGCCACTTATCACTGCAATAG 606 0.3746 MNLRTIIIIALSFVVVLLVLVGAFYIILKWRKIRRPSRVVGPTVTSYLNKRSGMGSFMLSSKIMSSRSMSLVSTIAHSILSVKTFSFSELENATTKFSSQRVLREGGFGNVYCGALDDGNEVAIKLLTRDGHNRDCEFVTEIEILSRLHHCNLVKLIGICIEGPRRCLVYELVNNGSVKSHLHGKLVTYFLWFWVCHLSLQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1390 201 Pfam Protein tyrosine and serine/threonine kinase 100 185 IPR001245 GO:0004672|GO:0006468
Aed2g1390 201 Gene3D Phosphorylase Kinase; domain 1 69 172 - -
Aed2g1390 201 PANTHER OS01G0750732 PROTEIN 1 185 - -
Aed2g1390 201 ProSiteProfiles Protein kinase domain profile. 97 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1390 201 SUPERFAMILY Protein kinase-like (PK-like) 62 193 IPR011009 -
Aed2g1390 201 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1390 Aed-Chr2 14650990 14652466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1390 3 184 Receptor kinase-like Gene Family AT5G56890 46.154 1.44e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aed2g1390 PK_Tyr_Ser-Thr 2.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1390 - - gmx:100784243 278.1