Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1332 ATGGCTGATGAGGGTTGTTTTGAGGGTTACCATGTTCCACAACAAAGCAGAAGAGACAAACTGAGAGTTGTGGCAACACAGAACCAACATGGTGGTACTCTCGTTGAACCCTCTTCGGCTTTGCTTCCTTTGTACGACCCTTCTTCGTATTTATCTTCTACTGATTTGTTAACGAGCTTCCACAACGGCCAAAAACACAACTTGGGTTGTGGGGTGAAAGAAGAACGTGCCAATTTGATGATGGGCTTTGCAGGAGGAGTTGTTGCTATGAACAATAATGGCTCTTCTTCCTCTTCTTGTTGTTCTTCTAACTCCTCTTCTGTTTCTTACTTGGATCCTGAATCGTCCTTGCCTACAATTCAGGTTATTAACAATACCAACAACAACAACAACATGTTTCTCTACCAACCACAGAACCTGAGAGAGTTTGATCAAAGTTATAACAATAACAACAACAATAATAATAATAATAATAGTGATGAGATCATGGTGTTCAAGCCTGTGCCTTTGTCTTTGTCTCTCTCATCACACACCAACGGCACTGTGAATCTTCAGCGGTATGGATCTGTGGTTTATGGTGATAAGGTTAGTGGTGTGATTTATGGTGGTGCTGCTTCTTCTGGTTTCAATAATGAGGTTTCGAGGTGCACAGTGCCAATGGGGCCATTCACTGGCTATGCTTCTATATTGAAGGGATCGAGGTTTTTGAAGCCTGCGCAGCAATTATTGGAAGAGTTATTATGTGATGTTGGTGTTGGTGGTGGTGGTGGTGGAGTTTGTGCTGAGAAGATCATGGCTGATGCATCGTTGATGGAACCTATTCCTATTCCTCCTCATGAGAGTTCAAGTGTAGATCCACTAGGAGATCATGGGGGTGATAATGGTCGCAAAAAGTCAAGGCTCTTAACTATGCTTGATGAGGTTTTGGTTGCAGTTTGCAATTTCACTTGCAGTTGCAGTATTACAGTTTTTGAGGTTTACAGAAGGTACAGGCAATACTATCAGCAGATGCACGCGGTGGTAACATCATTCGAGTATGTTTCAGGCCTGAGCAATGCAGCTCCCTATGCAAGTTTGGCTATAAAAGCCATGTCCAAACATTTTAGATGCTTGAAGAATGCAATCACTGATCAGCTTCAGTTTGCCAATAAGGCTCATTTTCACATAAGCAACAACAGGAGGGATGAATCTCCAAGCTATCCTACTGACACCGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGCAGCCAGGTAAATATCATTGATAACCAACCTTTTAAGTGCATGTTTGGTTTAAAGTTTGAAATGTTGTGCATGTTTAATGTAAATCTAATTGATAAAAGCAAAATGAAAAGAAAACCAAATATGCTCTAA 1380 0.413 MADEGCFEGYHVPQQSRRDKLRVVATQNQHGGTLVEPSSALLPLYDPSSYLSSTDLLTSFHNGQKHNLGCGVKEERANLMMGFAGGVVAMNNNGSSSSSCCSSNSSSVSYLDPESSLPTIQVINNTNNNNNMFLYQPQNLREFDQSYNNNNNNNNNNNSDEIMVFKPVPLSLSLSSHTNGTVNLQRYGSVVYGDKVSGVIYGGAASSGFNNEVSRCTVPMGPFTGYASILKGSRFLKPAQQLLEELLCDVGVGGGGGGVCAEKIMADASLMEPIPIPPHESSSVDPLGDHGGDNGRKKSRLLTMLDEVLVAVCNFTCSCSITVFEVYRRYRQYYQQMHAVVTSFEYVSGLSNAAPYASLAIKAMSKHFRCLKNAITDQLQFANKAHFHISNNRRDESPSYPTDTDKLMLAKQTGLSRSQVNIIDNQPFKCMFGLKFEMLCMFNVNLIDKSKMKRKPNML 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1332 459 CDD homeodomain 400 422 IPR001356 GO:0003677
Aed2g1332 459 Gene3D - 367 422 - -
Aed2g1332 459 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 21 400 - -
Aed2g1332 459 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 400 421 - -
Aed2g1332 459 SMART prehox3 224 377 IPR006563 -
Aed2g1332 459 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 21 400 - -
Aed2g1332 459 Pfam Associated with HOX 229 376 IPR006563 -
Aed2g1332 459 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 400 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1332 Aed-Chr2 13069250 13077404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1332 158 383 Homeobox Transcription Factor Family AT5G02030 48.018 1.22e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1332 - - gmx:100798496 508.064