Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1314 ATGTGTTCTAATCCGTGTCGTCTTGTTCACATGATCATTGTTCTACTTTTTGTTATCTCACATTTTGCACAGATATCTTCCCAGCTTGGCTCTAAGGTGGAACAGCTTCCTGGCTTTAAAGGCCCTCTCCCTTTTGAACTCGAAACTGGGTATGTGGGGTTGGGAGAAACAGATGATGATGAAATTGAAGTTTTCTACTACTTTGTTAAGTCGGAGAACAATCCTCAGGAAGATCCTCTTTTCCTTTGGCTAACTGGTGGTCCCGGTTGCTCTTCAATTTCGGGTCTTCTCTTTCAAGTTGGTTTGAAGAAAAGAATTGTCTTCTTCAATCTGAATGGTCCATTTATCCCAATGGTTTCATCTATGGTATCAAGCTTCATTTTTGTAGATTTACCTATTGGAACTGGCTTCTCGTATGCAAAAAATCTCTATGATCATCGGAGTGACTGGAAAGTAATTCACCATGCCCATCATTTTCTTAGAAAGTGGCTTATTGATCACCCGGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATATTCAGGCATTCCAGCCCCTGCTATTGTTCAAGAAATTTCGAATGGTTTGCAAGCATTTTTTCTTCCTGTTCTTTTACCAGTGACAGAATCAAATTCTAGAAAATATTTCCAGGGATATCTTCTAGGGAACCCCATGACATCATTGAGAAAAGAAAGAAATGATAAAATCCCCTTTGCTCATGGAATGGGACTGATTTCTGATGAACTCTATGTGTGCCTTTCAAGAATTAATAACCATGACATTTTGAATTACTACTGCGAATCTGATTTTGGTCTCAAACAAGAAGTTCCGAGAAGATCTTTGGCTCAGAAGTTTGAGGCCTCTCTTAACTCTCATATGATACTGCCAGACAAAAGATGCCAAGCCTACAATGATATGATTGTAAATCAATGGGCCAATGACGAAAGTGTTCGCAAGTCGCTGCATATTCGAGAGGGAACTATAGACAAATGGGAACGCTGCTACCGCACTGAATATGAGTTTCAGATCCCTAGTAGCTTCGAGTTTCATGTAAATGTCAGTGCAAAAGGCTATCGTTCCTTAATACACAGTGGGGATAAAGATGCAATTGTTCCTTTCTTGTCTACCCAAGCATGGATTAGGGCTCTAAACTACTCTATTGTGGATGATTGGAGGCCATGGCTTGTAAATGACCAAGTTGCAGGATATACAAGGACTTACTCAAATCAAATGACTTTTGCAACTATAAAGGGTGCAGGGCATGTAGCTACCTATTTTAAAATTGAAGAATGTTTCACCATGTTCACAAGGTGGATAGCTAAGCTGCCATTGAAATATAAGGGAAAGCCCTTTCCCTTTAGTAGAAACTATGAATTTTCTGATCTACTTAAGCTATCATCAAGGATTCTCTCTCCCTCAAGGAGTTATAAGGTTATGAGAAGAATGTAA 1455 0.3924 MCSNPCRLVHMIIVLLFVISHFAQISSQLGSKVEQLPGFKGPLPFELETGYVGLGETDDDEIEVFYYFVKSENNPQEDPLFLWLTGGPGCSSISGLLFQVGLKKRIVFFNLNGPFIPMVSSMVSSFIFVDLPIGTGFSYAKNLYDHRSDWKVIHHAHHFLRKWLIDHPEFLSNEFYIGADSYSGIPAPAIVQEISNGLQAFFLPVLLPVTESNSRKYFQGYLLGNPMTSLRKERNDKIPFAHGMGLISDELYVCLSRINNHDILNYYCESDFGLKQEVPRRSLAQKFEASLNSHMILPDKRCQAYNDMIVNQWANDESVRKSLHIREGTIDKWERCYRTEYEFQIPSSFEFHVNVSAKGYRSLIHSGDKDAIVPFLSTQAWIRALNYSIVDDWRPWLVNDQVAGYTRTYSNQMTFATIKGAGHVATYFKIEECFTMFTRWIAKLPLKYKGKPFPFSRNYEFSDLLKLSSRILSPSRSYKVMRRM 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1314 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 255 444 IPR001563 GO:0004185|GO:0006508
Aed2g1314 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 257 IPR001563 GO:0004185|GO:0006508
Aed2g1314 484 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 255 444 - -
Aed2g1314 484 Pfam Serine carboxypeptidase 37 442 IPR001563 GO:0004185|GO:0006508
Aed2g1314 484 Gene3D alpha/beta hydrolase 27 447 IPR029058 -
Aed2g1314 484 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 13 257 - -
Aed2g1314 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 413 426 IPR001563 GO:0004185|GO:0006508
Aed2g1314 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Aed2g1314 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Aed2g1314 484 SUPERFAMILY alpha/beta-Hydrolases 33 445 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1314 Aed-Chr2 12724719 12736934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1314 27 56 Calmodulin-binding Proteins AT2G22960 63.333 2.19e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1314 K16296 - gmx:100780069 587.03