Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1313 ATGTTCAACCCACCAAGGATGAGCAGAGTTTGTAATATGTGTTGCAATTTTCACATTATTTTTGTGATTTCTCTTTCACTTTTAGTACAGATATCATCTCAGCATGGCTCCAAGGTAGAAGTGCTTCCTGGCTTTGAAGGCCCTCTTCCTTTTGAACTCGAAACTGGGTATGTGGGATTAGGAGAAAGAGATGATGACTTGCAAGTGTTTTACTACTTTGTTAAGTCAGAGAATGACCCTCAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGTTGCTCTTCATTTTCAGGTCTTGCCTTTCAAATAGGTCCACTTAAATTCAAGACTGAGGAGTATGATGGGAGCTTGCCAAATTTGATATTGAGGCCAGGGTCCTGGACAAAGGTATGTAATATTATTTTTGTAGATTTGCCTTTTGGAACTGGCTTCTCATATGCAAAAAATCTCACTGCTCAACGGAGTGATTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGAGCACCCCGAATTTATTTCAAATGAGTTTTACATGGGAGCTGATTCATATTCTGGCATACCTGCCCCTGCTATTGTTCAGGAAATTTCAAATGCAAATGAAATAGGTCTCCAACCACAGATAAATCTCCAGTCACTGCAGAGAAATTGTAGAGGAGAGTATGCAGATATAGATTCCAGAAATGAATTGTGTTTAAGAGATCTCAACTACTATGATGAGGCAAGTAATGAACAATCCCTTCTATGCCTTTCAAGAATTAATAAATTCCACATTTTGGATCGCTATTGCAAAGATGATTCGCCTGAGAAACATGAACCCCTGTTGAGGAGGTCTCTTAATTCTTATCTCAGAATGCCAGACATAAGATGCCAAATTTTTGGGTTTTTCCTTGCCACTCAATGGGCCAATGATGAGAGTGTTCGGATGTCACTGCATATTCGAGAGATCTTAAGTAGCTTTGAGTTTCATGTAAATCTCAGTACAAAAGGATATCGTTCATTAATATACAGATACACAAGAACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGCTCAGGACATACTGCTCCCGAGTACAACCCTGAGGAAGGTTTCGCTATGTTCACTAGATGGATAGCTAATATGCCATTGTAA 1161 0.3953 MFNPPRMSRVCNMCCNFHIIFVISLSLLVQISSQHGSKVEVLPGFEGPLPFELETGYVGLGERDDDLQVFYYFVKSENDPQKDPLMLWLTGGPGCSSFSGLAFQIGPLKFKTEEYDGSLPNLILRPGSWTKVCNIIFVDLPFGTGFSYAKNLTAQRSDWKLVHHTHQFLRKWLIEHPEFISNEFYMGADSYSGIPAPAIVQEISNANEIGLQPQINLQSLQRNCRGEYADIDSRNELCLRDLNYYDEASNEQSLLCLSRINKFHILDRYCKDDSPEKHEPLLRRSLNSYLRMPDIRCQIFGFFLATQWANDESVRMSLHIREILSSFEFHVNLSTKGYRSLIYRYTRTYSNQMTFATVKGSGHTAPEYNPEEGFAMFTRWIANMPL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1313 386 Pfam Serine carboxypeptidase 341 383 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 Pfam Serine carboxypeptidase 43 220 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 Gene3D - 329 386 - -
Aed2g1313 386 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 219 343 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 219 343 - -
Aed2g1313 386 Gene3D alpha/beta hydrolase 31 278 IPR029058 -
Aed2g1313 386 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 PRINTS Carboxypeptidase C serine protease (S10) family signature 353 366 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 219 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 345 385 IPR001563 GO:0004185|GO:0006508
Aed2g1313 386 SUPERFAMILY alpha/beta-Hydrolases 42 385 IPR029058 -
Aed2g1313 386 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 345 385 - -
Aed2g1313 386 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 16 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1313 Aed-Chr2 12688695 12695922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1313 33 62 Calmodulin-binding Proteins AT2G22960 66.667 1.46e-07 49.7