Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1299 ATGTCAGAGAAAGACACCGTGCATGAGTGGTGGCGCGAGTCGCGGAGGGGCGATGAGAATCGTGCAGGGGAGGTGGTGGAGGGAGAGAGATGTAGCAGCTCAAAGGGGTGTTTAGCAAGGAAACAAGTGGAGAGAAACAGATCCGAACCAACAATGTTTATAGTCACATACACTGGTGAACACAACCACCCTGCTCCTACTCACATAAACTCTCTTGCTGGCTCTACACGCCACAAACCTCAAACCGAAACAAAACCGGTTTCTCCTTCCACCTCAGAGGTGGAAATGGAAGAAGAGGTGGCACAACAACACAGTGCAAAGTCAGAGAGCACAGAAGAAGAAGACATGGAAGATCTCATGAAAGATGATGAGGAATTACCAAACGAATTTGAATTAGCAGAAACGGTTGTAACTGATGATTTCTTTGAAGGCTTAGAGGAACTGACAGGGTCTGCCACTGAACACTTTACAATTAGTAGTAGCAACATTGATCGGTGGCCACTGGCCAATAATGCTGCCACTGCCGCTGGTGGTAGCTGA 540 0.4796 MSEKDTVHEWWRESRRGDENRAGEVVEGERCSSSKGCLARKQVERNRSEPTMFIVTYTGEHNHPAPTHINSLAGSTRHKPQTETKPVSPSTSEVEMEEEVAQQHSAKSESTEEEDMEDLMKDDEELPNEFELAETVVTDDFFEGLEELTGSATEHFTISSSNIDRWPLANNAATAAGGS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1299 179 Gene3D WRKY domain 12 67 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g1299 179 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 30 178 - -
Aed2g1299 179 MobiDBLite consensus disorder prediction 97 111 - -
Aed2g1299 179 Pfam WRKY DNA -binding domain 30 64 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1299 179 SUPERFAMILY WRKY DNA-binding domain 30 66 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g1299 179 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 30 178 IPR044810 GO:0003700
Aed2g1299 179 Coils Coil 94 114 - -
Aed2g1299 179 SMART WRKY_cls 30 65 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1299 179 ProSiteProfiles WRKY domain profile. 30 66 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g1299 179 MobiDBLite consensus disorder prediction 59 124 - -
Aed2g1299 179 MobiDBLite consensus disorder prediction 63 91 - -
Aed2g1299 179 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1299 Aed-Chr2 12327546 12329444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1299 30 178 WRKY Transcription Factor Family AT4G01250 49.032 8.00e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g1299 WRKY 6.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1299 K13425 - gmx:100815829 239.965